XP_002160376.3 has 544 amino acids
Query: TMEM175 [M=88]
Accession: PF06736.15
Description: Endosomal/lysosomal potassium channel TMEM175
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.9e-26 76.7 20.7 3.8e-18 52.1 0.7 3.6 4 XP_002160376.3
Domain annotation for each sequence (and alignments):
>> XP_002160376.3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 37.2 2.9 1.6e-13 1.6e-13 1 88 [] 49 138 .. 49 138 .. 0.90
2 ! 52.1 0.7 3.8e-18 3.8e-18 1 88 [] 274 367 .. 274 367 .. 0.90
3 ? -2.1 0.3 0.32 0.32 35 47 .. 396 408 .. 372 449 .. 0.55
4 ? -1.8 0.2 0.26 0.26 41 60 .. 468 487 .. 460 500 .. 0.69
Alignments for each domain:
== domain 1 score: 37.2 bits; conditional E-value: 1.6e-13
TMEM175 1 RleafsDgvfAiaiTllvlelk.vpeke.eeellaallellpellayllsFlvvaifWinhhrlfrlikkvdkrllwlnlllllfisllP 88
R+ +sD v+A +T lvl ++ + +++ ++ ll+ + +++ +++ +++ Fl++ ++W n ik+vd+ +l l ++ +l +s+lP
XP_002160376.3 49 RFLGYSDTVMATCATFLVLPIRnLKKHTeNQPLLDFIYSNYLQFIEFFFGFLIILTIWENLNIRAIVIKRVDDFILALVIFEMLATSILP 138
67789****************74555554666666667**************************************************99 PP
== domain 2 score: 52.1 bits; conditional E-value: 3.8e-18
TMEM175 1 RleafsDgvfAiaiTllvlelkv...peke...eeellaallellpellayllsFlvvaifWinhhrlfrlikkvdkrllwlnlllllfisllP 88
Rle++sD +Ai++ +l+++++v p+k+ + l +l +++pe+l++l sF +v ++W+ +h++++l+k+vd+++l+++ ++l+f++l+P
XP_002160376.3 274 RLETMSDNGVAIIACILIVDITVddfPQKNavgKLGLNYNLNHMTPEFLTFLASFSLVSALWYINHSVLHLVKTVDTIMLYFQKTFLVFCCLCP 367
9********************77555776687555566677799************************************************99 PP
== domain 3 score: -2.1 bits; conditional E-value: 0.32
TMEM175 35 llellpellayll 47
+++ + ++++yl
XP_002160376.3 396 FISSIANFFIYLY 408
2233444444444 PP
== domain 4 score: -1.8 bits; conditional E-value: 0.26
TMEM175 41 ellayllsFlvvaifWinhh 60
++l+ l+sF+ i+ +nh
XP_002160376.3 468 TFLSALFSFFASKIVLMNHV 487
56677777776666666664 PP
Or compare XP_002160376.3 to CDD or PaperBLAST