biolip::8dhmA has 367 amino acids
Query: TMEM175 [M=88]
Accession: PF06736.15
Description: Endosomal/lysosomal potassium channel TMEM175
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.9e-49 150.4 4.9 5.4e-27 80.4 0.0 2.7 2 biolip::8dhmA
Domain annotation for each sequence (and alignments):
>> biolip::8dhmA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 68.4 3.8 3.1e-23 3.1e-23 1 88 [] 6 95 .. 6 95 .. 0.91
2 ! 80.4 0.0 5.4e-27 5.4e-27 1 88 [] 151 247 .. 151 247 .. 0.95
Alignments for each domain:
== domain 1 score: 68.4 bits; conditional E-value: 3.1e-23
TMEM175 1 RleafsDgvfAiaiTllvlelkvpeke.eeellaall.ellpellayllsFlvvaifWinhhrlfrlikkvdkrllwlnlllllfisllP 88
R+ +fsD++++i++T+++l ++ e + e+++ ++++ l++++ +yl++Fl+v++ W++h rlf+ + k+d++l +lnl+++++i++lP
biolip::8dhmA 6 RMLSFSDALLSIIATVMILPVTHTEISpEQQFDRSVQrLLATRIAVYLMTFLIVTVAWAAHTRLFQVVGKTDDTLALLNLACMMTITFLP 95
8899***************998766665677777787556778**********************************************9 PP
== domain 2 score: 80.4 bits; conditional E-value: 5.4e-27
TMEM175 1 RleafsDgvfAiaiTllvlel...kvpeke......eeellaallellpellayllsFlvvaifWinhhrlfrlikkvdkrllwlnlllllfisll 87
R+eafsDgv+Ai++Tll+l++ +vp+ + +++l+aal ++ p++lay+ sF++v+++W++hh+lf +++k+++++ +ln+l l+f+ l
biolip::8dhmA 151 RVEAFSDGVYAIVATLLILDIcedNVPDPKdvkerfSGSLVAALSATGPRFLAYFGSFATVGLLWFAHHSLFLHVRKATRAMGLLNTLSLAFVGGL 246
99*******************998788877889999999*****************************************************9888 PP
TMEM175 88 P 88
P
biolip::8dhmA 247 P 247
7 PP
Or compare biolip::8dhmA to CDD or PaperBLAST