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Align XP_637749.1 to PF06840 (DUF1241)

XP_637749.1 has 478 amino acids

Query:       DUF1241  [M=150]
Accession:   PF06840.11
Description: Protein of unknown function (DUF1241)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.9e-11   30.0   0.3    6.3e-11   28.3   0.1    2.0  3  XP_637749.1  


Domain annotation for each sequence (and alignments):
>> XP_637749.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0      0.33      0.33     105     116 ..     157     168 ..     130     170 .. 0.68
   2 ?   -3.0   0.0      0.29      0.29      27      46 ..     253     272 ..     245     288 .. 0.64
   3 !   28.3   0.1   6.3e-11   6.3e-11       7      56 ..     421     475 ..     416     478 .] 0.87

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.33
      DUF1241 105 iPdeindRktfL 116
                  + d+++ R+tf+
  XP_637749.1 157 LTDQMTKRNTFV 168
                  456777777776 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.29
      DUF1241  27 aaqtLraalskaekesPglt 46 
                  a + L++ ++ka k++ +lt
  XP_637749.1 253 AKDLLKHKFIKAAKKTSSLT 272
                  45556666666666655554 PP

  == domain 3  score: 28.3 bits;  conditional E-value: 6.3e-11
      DUF1241   7 lvlqvllrpvldklekkd.....vaaaqtLraalskaekesPgltqdlvkgllkk 56 
                   +l+ +++pvl+kl k++     ++a  +L+ a+ +aek++Pg+t+ l++++++ 
  XP_637749.1 421 SALTSVIYPVLSKLLKNTsdenvINALAQLKMAFDNAEKAKPGITHSLIAQIIET 475
                  578889*******98773357888999*************************986 PP



Or compare XP_637749.1 to CDD or PaperBLAST