PaperBLAST – Find papers about a protein or its homologs

 

Align WP_050417953.1 to PF06980 (DUF1302)

WP_050417953.1 has 681 amino acids

Query:       DUF1302  [M=534]
Accession:   PF06980.15
Description: Protein of unknown function (DUF1302)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-48  151.7   1.7    2.8e-48  151.2   1.7    1.1  1  WP_050417953.1  


Domain annotation for each sequence (and alignments):
>> WP_050417953.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.2   1.7   2.8e-48   2.8e-48      36     500 ..      20     614 ..      13     624 .. 0.83

  Alignments for each domain:
  == domain 1  score: 151.2 bits;  conditional E-value: 2.8e-48
         DUF1302  36 tlsygagvrtedrdpsligkanggaaasangddGnln.fdkgdl.vsnrlkatseldlkygnygffvrgkafyDavydnknedesnattnangga 128
                     +l++g +v + d +   ++ ++ +++a++ +++ + +    g   ++n+l+++ + ++  g + f+  +++  D+vy  ++++ ++++ +a   +
  WP_050417953.1  20 SLTVGGAVQAADENLPDLASSTTPWVADVYYENHTARrSRAGLAkFRNTLQVEADRQMGDG-WAFRGILRGSWDGVYQLNKDEYGRNAGGAITLE 113
                     678888888888888888888888885554444444414444447********99999999.*****************9998777777777777 PP

         DUF1302 129 gngd.....................................................................................sddard 138
                     ++ +                                                                                      +++ d
  WP_050417953.1 114 NTAApllppvpttagtplnltqvphggginnpigtaiglpptnalgfdlaanpndgmrvlgdrwhrpergavfgvpvrpcdrdsrgcrdFGGYGD 208
                     66669********************************************************9999999999999999988888888777555556 PP

         DUF1302 139 eagrgae..........lldayvygsf.dlgdrplsvRlGrQvvnWGeslfvlnGinainplDvsklrrPGa..elkeallPvpmvsaslqlt.d 219
                      + r++e          l++ y+ ++f   ++++l ++lGrQ+v+WG++++ +  + +inp+D+s+    ++  el+++++P++ ++a+++++  
  WP_050417953.1 209 LNLRELEtpefndrldfLREFYAKKTFpLADGTELFLKLGRQQVVWGRTDL-FRVLDVINPVDYSRN---NIydELQDIRIPMWIAQAEYRMGaS 299
                     66666668889999999**********5555555*****************.688999******875...55526******************77 PP

         DUF1302 220 glsleafyq..feweptrlppv............GtFfstsdi.vgpggeglllatgnaaal.......tgsaagtvvpraadkepsdsgqwGla 292
                     +   + ++q  ++++++r+++              +Ff      +++gg+++++++ +a ++       +g+++++v++++ + ++ +++q G++
  WP_050417953.1 300 ESMQDRNVQvvWNFDKFRPNNLgqcgtpnvmldaACFFRGFANlWDNGGTVANFSPVPAGTAgawaatdFGPHQIGVRKVHLPAWSLSNTQLGVK 394
                     777899****************************9999988777*************99999*******99************************ PP

         DUF1302 293 lrylaee.tefglyylnyhsrlPvls................asaavdadnaay............fleY.pediklfGaSfnttlgg.dtavag 356
                     ++++++    f+l++l y+s+lP+l+                +                       ++++ + +++l+G S+++++ + ++a+++
  WP_050417953.1 395 YEGITQGgLAFSLNALTYRSQLPSLHafsagavnpftggtgnT----------TppaagvpvshliAFDIhYPRVNLVGGSLDFQIPDaNAAIRM 479
                     ***99999******************88877666655444440..........14445666666678888899*************8789***** PP

         DUF1302 357 Evsyrpnaplqvdtadllaaalaptapeeyvrgyergdvlqaqlg..........lga.dsltlvaEvavthvpdlpddesaagnaagcaadgya 440
                     E + ++++ +  +               ++ + y +  vl+  +g            + + + ++a+++++h+ d++ ++               
  WP_050417953.1 480 EGALTHGEEFVNT---------------ARRELYSKNRVLRTVIGvdrptfipfiS-TtRATQISAQLFWQHIIDHERHD--------------- 543
                     *******555544...............4556778888888888866555555542.14*********************............... PP

         DUF1302 441 trfswG.yrlrlsltynd.vlpgld.........lspslsfshdvkGnspdag.....fvegrksvslgltadyqs 500
                          G ++ +  ++++d ++ +l          +sp++++++d++ ++++ +      v ++ +v+lg +++y +
  WP_050417953.1 544 -----GpLGTVGIVDWEDnFIGTLLikgflagdrVSPQVMVARDFRAKALTVApqiewSVTDDFKVTLGANFKYTN 614
                     .....43444455555553333331223333334******************9999998899***********987 PP



Or compare WP_050417953.1 to CDD or PaperBLAST