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Align VIMSS3788319 to PF06998 (DUF1307)

VIMSS3788319 has 172 amino acids

Query:       DUF1307  [M=123]
Accession:   PF06998.11
Description: Protein of unknown function (DUF1307)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.5e-38  116.3  12.6    5.4e-38  116.0  12.6    1.1  1  VIMSS3788319  


Domain annotation for each sequence (and alignments):
>> VIMSS3788319  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.0  12.6   5.4e-38   5.4e-38       8     123 .]      40     160 ..      30     160 .. 0.94

  Alignments for each domain:
  == domain 1  score: 116.0 bits;  conditional E-value: 5.4e-38
                   EETTEEEEEEEEEETTEEEEEEEEEEEETTTSS-SSHHH.....HHHHHHHHHTTTTTSSS-EEEEEE-SSEEEEEEEEETTS--HHHHTTTT--TT CS
       DUF1307   8 nengadikltytykgDkvlkqtaeskitysdlgvetkee.....akeklesleekYkgikGvsekltykddkliekvtidyekadldelkkldgvtt 99 
                   ++n+ d++lty++kgD v+kqt+e+ i+y++lg+ +++e     ak k+e+l+++Y+ +kG++ek+ ++++ + e+++idy+kadl+el++l+g+++
  VIMSS3788319  40 QSNQFDMRLTYYHKGDIVTKQTTENFISYKSLGIDESQEeqknaAKAKIEELSKQYQTVKGIKEKVSFDKNGIKENIEIDYDKADLKELASLPGMMI 136
                   4899******************************9997789999***************************************************** PP

                   -HHHHHH--BHHHHHHHHHHTT-- CS
       DUF1307 100 qkekkkkkislkktekllekqGyk 123
                   ++ek++kkis+k + ++lek+G+k
  VIMSS3788319 137 SNEKNAKKISMKASGEALEKSGFK 160
                   ***********************7 PP



Or compare VIMSS3788319 to CDD or PaperBLAST