VIMSS179167 has 50 amino acids
Query: DUF1328 [M=39]
Accession: PF07043.17
Description: Protein of unknown function (DUF1328)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-18 53.4 21.9 1.3e-18 53.4 21.9 1.7 2 VIMSS179167
Domain annotation for each sequence (and alignments):
>> VIMSS179167
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 53.4 21.9 1.3e-18 1.3e-18 1 39 [] 2 40 .. 2 40 .. 0.98
2 ! 4.6 1.2 0.0023 0.0023 2 12 .. 36 46 .. 35 47 .. 0.82
Alignments for each domain:
== domain 1 score: 53.4 bits; conditional E-value: 1.3e-18
DUF1328 1 liFlviAliAgvlGFgGiAgaaagIAkiLFfiFlvlfvv 39
l+Flv+Al+Ag+lGFgGiAga+agIA+iLFf Fl+l+v+
VIMSS179167 2 LVFLVVALVAGALGFGGIAGASAGIAQILFFFFLALLVI 40
79***********************************98 PP
== domain 2 score: 4.6 bits; conditional E-value: 0.0023
DUF1328 2 iFlviAliAgv 12
lvi+liA +
VIMSS179167 36 ALLVISLIASA 46
679******76 PP
Or compare VIMSS179167 to CDD or PaperBLAST