PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS6999 to PF07119 (DUF1375)

VIMSS6999 has 70 amino acids

Query:       DUF1375  [M=51]
Accession:   PF07119.16
Description: Protein of unknown function (DUF1375)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence  Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.9e-11   28.3   7.2    4.9e-09   22.7   7.2    2.3  1  VIMSS6999  


Domain annotation for each sequence (and alignments):
>> VIMSS6999  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   7.2   4.9e-09   4.9e-09      28      49 ..      45      66 ..      30      67 .. 0.84

  Alignments for each domain:
  == domain 1  score: 22.7 bits;  conditional E-value: 4.9e-09
    DUF1375 28 llpllivDLPlSlvlDTllLPy 49
                + l+i+DLPlS +lDT+lLPy
  VIMSS6999 45 QWGLPILDLPLSFLLDTVLLPY 66
               57899****************9 PP



Or compare VIMSS6999 to CDD or PaperBLAST