PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS2057131 to PF07338 (DUF1471)

VIMSS2057131 has 95 amino acids

Query:       DUF1471  [M=56]
Accession:   PF07338.13
Description: Protein of unknown function (DUF1471)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-22   65.9   0.0    2.2e-22   65.2   0.0    1.3  1  VIMSS2057131  


Domain annotation for each sequence (and alignments):
>> VIMSS2057131  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.2   0.0   2.2e-22   2.2e-22       1      55 [.      39      94 ..      39      94 .. 0.98

  Alignments for each domain:
  == domain 1  score: 65.2 bits;  conditional E-value: 2.2e-22
                  EEEEEEEEECSS-SSHHHHHHHHHHHHHHCT-SEEEECCECC...CTTEEEEEEEE CS
       DUF1471  1 lqpigtisvsgvfgspsdledalskkAdekGAkyYrItsare.nnggnlhatAelY 55
                  l++ig+isvs+ +g p+d+e+ ++ kAde+GA+ YrI+ + e ++++n++++A+lY
  VIMSS2057131 39 LNEIGQISVSNISGDPQDVERIVALKADEQGASWYRIITMYEdQQPDNWRVQAILY 94
                  689***************************************************** PP



Or compare VIMSS2057131 to CDD or PaperBLAST