PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS245562 to PF07510 (DUF1524)

VIMSS245562 has 565 amino acids

Query:       DUF1524  [M=139]
Accession:   PF07510.11
Description: Protein of unknown function (DUF1524)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.7e-31   93.1   0.0    1.7e-30   91.9   0.0    1.6  1  VIMSS245562  


Domain annotation for each sequence (and alignments):
>> VIMSS245562  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.9   0.0   1.7e-30   1.7e-30      18     138 ..     426     540 ..     413     541 .. 0.89

  Alignments for each domain:
  == domain 1  score: 91.9 bits;  conditional E-value: 1.7e-30
      DUF1524  18 sssrkklryilakelesalreedeeege.akkltiEHilPqslaekwegagqedeekreelvndlgNLtlltkslNsslsnkpfleKrdlykksslrl 114
                  + ++  +ry+l+ e+e +lr+ +e++   ++k+ iEHi+Pq++++ +      +  ++ ++v ++gNLtll +++N++++n++f+ Kr +++ks++ l
  VIMSS245562 426 NLDTSAARYLLR-EIEISLRNGEETDVArPPKIHIEHIYPQKPKAGE------RWSNHTDYVGKIGNLTLLARRINTAIKNSEFAVKRLELAKSEIFL 516
                  33444899****.*******88777766677888***********88......7788***************************************** PP

      DUF1524 115 nrklaekdewdeeaiearqeaLak 138
                  +r++a++  wd +ai++rq++L k
  VIMSS245562 517 TREVAAHGMWDAAAIDQRQDELGK 540
                  **********************87 PP



Or compare VIMSS245562 to CDD or PaperBLAST