PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS28156 to PF07510 (DUF1524)

VIMSS28156 has 201 amino acids

Query:       DUF1524  [M=139]
Accession:   PF07510.15
Description: Protein of unknown function (DUF1524)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.4e-29   86.5   4.7      1e-28   86.2   4.7    1.3  1  VIMSS28156  


Domain annotation for each sequence (and alignments):
>> VIMSS28156  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.2   4.7     1e-28     1e-28      23     138 ..      55     179 ..       8     180 .. 0.81

  Alignments for each domain:
  == domain 1  score: 86.2 bits;  conditional E-value: 1e-28
     DUF1524  23 klryilagrlesdlyeedesknsskkefd.......iEHilPqnlaekw.gageddeekreelvndlgNLtlltgslNsslsnkdfleKreayek.... 109
                 +lr +la   ++ +++e  +k               +EHilPq+++ ++ ++ ++d+ekre++vn+++NLtll++++N ++ n df+eKr+ y      
  VIMSS28156  55 WLRPVLA-LANYFMTDE--EKPH-F---IamdaetqVEHILPQTPKRGSqWNADFDKEKREKWVNHIANLTLLKRKKNAKALNGDFDEKRKIYGGkdps 146
                 6677777.444344422..1111.1...12224455***********777*******************************************9999** PP

     DUF1524 110 ...sclylnrkla.vkdkwneeviearqeaLak 138
                    sc+ ++++l  ++ kw+e+ +++r + L +
  VIMSS28156 147 kviSCYDITKELYsDYRKWDEKSLQKRYDFLYE 179
                 ************99*************998865 PP



Or compare VIMSS28156 to CDD or PaperBLAST