PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS4575165 to PF07510 (DUF1524)

VIMSS4575165 has 252 amino acids

Query:       DUF1524  [M=139]
Accession:   PF07510.11
Description: Protein of unknown function (DUF1524)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.1e-20   59.3   0.0    2.6e-20   58.9   0.0    1.1  1  VIMSS4575165  


Domain annotation for each sequence (and alignments):
>> VIMSS4575165  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.9   0.0   2.6e-20   2.6e-20       2     138 ..      99     236 ..      98     237 .. 0.88

  Alignments for each domain:
  == domain 1  score: 58.9 bits;  conditional E-value: 2.6e-20
       DUF1524   2 prdeefrrallnaklysssrkklryilakelesalree.deeege..akklt..iEHilPqslaekwegagqedeekreelvndlgNLtlltkslN. 92 
                   +rd++++r+l +a+l+++sr +  ++ +++l+ ++++  +    +  ++++t  i+H+++   a+   ga++  + +r+ l+nd+ NL++++++ N 
  VIMSS4575165  99 TRDDALARDLVEAHLKPGSR-C--VVVSGRLH-DPYTGsTLAWRRgrHTSTTvqIDHVVALGNAWVT-GAQHLPAPTRRALANDPLNLVAVDGPANe 190
                   79****************97.6..89999***.777662444444435555599***********99.****************************8 PP

       DUF1524  93 ..sslsnkpfleKrdlykksslrlnrklaekdewdeeaiearqeaLak 138
                     ++   +++l+++++y  ++ +++r++a+k++++ +++ a+++a+a+
  VIMSS4575165 191 akRDGDAATWLPPNKAY--RCDYVARQIAVKTKYQLWVTPAEKTAMAR 236
                   87555579*********..***************************97 PP



Or compare VIMSS4575165 to CDD or PaperBLAST