PaperBLAST – Find papers about a protein or its homologs

 

Align WP_003123529.1 to PF07786 (HGSNAT_cat)

WP_003123529.1 has 384 amino acids

Query:       HGSNAT_cat  [M=222]
Accession:   PF07786.16
Description: Heparan-alpha-glucosaminide N-acetyltransferase, catalytic
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-20   59.2   8.1    2.3e-20   59.2   8.1    2.0  2  WP_003123529.1  


Domain annotation for each sequence (and alignments):
>> WP_003123529.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2   8.1   2.3e-20   2.3e-20       1     187 [.      10     218 ..      10     231 .. 0.76
   2 ?   -0.9   0.3     0.054     0.054     204     220 ..     303     319 ..     257     369 .. 0.68

  Alignments for each domain:
  == domain 1  score: 59.2 bits;  conditional E-value: 2.3e-20
      HGSNAT_cat   1 RiweiDalRGlAlilMiifHf..lfdLeffgylevdla..sg...fwvlfarliaslFlfivGvslvlahskslrk....rkflkRglkilaaal 84 
                     R+ +iDalRGl ++ M++ H+  +f L+     ++d+a  ++   + +++a+l a +F+f+ G+s  l  +k++ +      ++kRgl ++a+ l
  WP_003123529.1  10 RLHSIDALRGLVMLFMLLDHVreTFFLHRQVGDPMDVAstEPalfLSRTLAHLCAPVFVFLTGLSAFLYGEKRQGRravsAFLFKRGLFLVALEL 104
                     8999****************74445555554444555432441113445667899*************988877776774445688876666655 PP

      HGSNAT_cat  85 .litavtylvfpesfivFGiLhlialasllallflrlpkllllllallilalglllkealfdtp...lllwlglss.......ekfstlDyvplf 168
                      l++++ ++ +p ++i+  ++  i+l++l   ++l lp++ll++l++l++a + ll+   f +    +l w  l++       +  +    +pl+
  WP_003123529.1 105 tLVNFAWTFQLPPTVIYLQVIWAIGLSMLALAALLWLPRPLLAALGVLLVAGHNLLDPLHFAPGsawHLPWAVLHDrgwieagDALRLRTSYPLL 199
                     133344447899**************************************99999988766554444566666666666666667788899**** PP

      HGSNAT_cat 169 PWlgvvllGialgkllykk 187
                     PW+gv+ lG+a+g+++   
  WP_003123529.1 200 PWIGVIALGYAAGNWFSGA 218
                     **************99755 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.054
      HGSNAT_cat 204 rvlallGrhsLliYlih 220
                     ++l+ +G   +++Yl+h
  WP_003123529.1 303 KALVAFGGAPMFFYLLH 319
                     33444444444444444 PP



Or compare WP_003123529.1 to CDD or PaperBLAST