G0S0T5 has 330 amino acids
Query: MCP1_TM [M=105]
Accession: PF07950.15
Description: MDM10-complementing protein 1, transmembrane domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.3e-45 139.0 5.6 2.4e-39 120.6 4.6 2.2 2 G0S0T5
Domain annotation for each sequence (and alignments):
>> G0S0T5
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.5 0.0 2.8e-07 2.8e-07 2 60 .. 87 142 .. 86 185 .. 0.87
2 ! 120.6 4.6 2.4e-39 2.4e-39 3 104 .. 193 310 .. 191 311 .. 0.97
Alignments for each domain:
== domain 1 score: 17.5 bits; conditional E-value: 2.8e-07
MCP1_TM 2 llglHvlvnrivPllvegdsskvglayvahglarhpvlsllayaaLvgvgvlHivsGla 60
+ lH++++ ++Pl + s+++ + +a+++++ p + ++v +++H++sGla
G0S0T5 87 FSTLHLATTSLIPLAARSVASSESYLLLAREIYQTPLS---EPLLVVLPAAAHVASGLA 142
6789************999999**********999999...9999999**********9 PP
== domain 2 score: 120.6 bits; conditional E-value: 2.4e-39
MCP1_TM 3 lglHvlvnrivPllvegdsskvglayvahglarhpvlsllayaaLvgvgvlHivsGlakwlglapel................kkkkrrrrwliingiaaav 88
l++H++vnr +Pllvegds++vgla+vahg+arhpv+s++ay +L+++g++H+v+G+akw gla+ + ++krrrr l+ing+aa++
G0S0T5 193 LAAHAFVNRGLPLLVEGDSANVGLAFVAHGFARHPVISYAAYGVLLVAGCGHMVWGWAKWAGLAQGAgwglervsgnisvdreARRKRRRRLLMINGAAAVA 294
689*************************************************************999****************88999999*********** PP
MCP1_TM 89 aalwlaGgLgvvkrgg 104
+lw++Gg+g+v++gg
G0S0T5 295 IGLWAVGGIGIVAKGG 310
*************997 PP
Or compare G0S0T5 to CDD or PaperBLAST