XP_045283907.1 has 352 amino acids
Query: MCP1_TM [M=105]
Accession: PF07950.15
Description: MDM10-complementing protein 1, transmembrane domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.5e-43 132.9 7.9 4.6e-38 116.4 6.8 2.2 2 XP_045283907.1
Domain annotation for each sequence (and alignments):
>> XP_045283907.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 15.5 0.0 1.1e-06 1.1e-06 2 76 .. 104 169 .. 103 189 .. 0.82
2 ! 116.4 6.8 4.6e-38 4.6e-38 1 102 [. 204 323 .. 204 326 .. 0.98
Alignments for each domain:
== domain 1 score: 15.5 bits; conditional E-value: 1.1e-06
MCP1_TM 2 llglHvlvnrivPllvegdsskvglayvahglarhpvlsllayaaLvgvgvlHivsGlakwlglapelkkkkrrr 76
+l lH++++ ++Pl+ + ++ + + + + l+++p+l + +L +++H+ +G+a l + + +rr
XP_045283907.1 104 FLTLHLTNTSLIPLMTNSITAAEPYLLLTRPLYQSPAL---EPFLLTIPVLTHLSAGVA--LR----ILRARRRA 169
899*************999999***************9...9*****************..22....22233333 PP
== domain 2 score: 116.4 bits; conditional E-value: 4.6e-38
MCP1_TM 1 pllglHvlvnrivPllvegdsskvglayvahglarhpvlsllayaaLvgvgvlHivsGlakwlglapel..................kkkkrrrr 77
pl++ Hvlvnr+vP++v+g+ss+vgl++vahg+ar+p+l+ +yaaLvgvgv+H+v+G+a+w+g+++e+ ++++ r+
XP_045283907.1 204 PLFASHVLVNRVVPVYVDGGSSGVGLGFVAHGIARAPWLMRGWYAALVGVGVWHVVGGWAWWMGYKTEMtetgrslgpnggvlgsmdWRRRSRNV 298
799****************************************************************99******************999***** PP
MCP1_TM 78 wliingiaaavaalwlaGgLgvvkr 102
++++ g++a++ alwlaGgLgv +r
XP_045283907.1 299 RWVVIGVSATGIALWLAGGLGVLGR 323
**********************998 PP
Or compare XP_045283907.1 to CDD or PaperBLAST