NP_079614.1 has 200 amino acids
Query: COX24_C [M=33]
Accession: PF08213.15
Description: Mitochondrial mRNA-processing protein COX24, C-terminal
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.7e-17 47.5 16.3 6.7e-17 47.5 16.3 1.8 2 NP_079614.1
Domain annotation for each sequence (and alignments):
>> NP_079614.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 47.5 16.3 6.7e-17 6.7e-17 1 32 [. 128 159 .. 128 160 .. 0.96
2 ? -4.6 2.7 1 1 7 20 .. 165 167 .. 162 176 .. 0.44
Alignments for each domain:
== domain 1 score: 47.5 bits; conditional E-value: 6.7e-17
COX24_C 1 adSVlrKRrkKMkKHKyKKlrKrtRalrrrlg 32
+++Vl++Rr+KM++HKy+Kl KrtR+lrr+++
NP_079614.1 128 CKNVLKIRRRKMNHHKYRKLVKRTRFLRRKVR 159
89****************************86 PP
== domain 2 score: -4.6 bits; conditional E-value: 1
COX24_C 7 KRrkKMkKHKyKKl 20
K K
NP_079614.1 165 K-----------KQ 167
2...........22 PP
Or compare NP_079614.1 to CDD or PaperBLAST