PaperBLAST – Find papers about a protein or its homologs

 

Align Q6PI41 to PF08213 (COX24_C)

Q6PI41 has 162 amino acids

Query:       COX24_C  [M=33]
Accession:   PF08213.15
Description: Mitochondrial mRNA-processing protein COX24, C-terminal
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-17   47.8  14.4    5.2e-17   47.8  14.4    2.0  2  Q6PI41    


Domain annotation for each sequence (and alignments):
>> Q6PI41  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8  14.4   5.2e-17   5.2e-17       1      32 [.      90     121 ..      90     122 .. 0.96
   2 ?   -3.2   3.0      0.45      0.45      18      23 ..     127     132 ..     124     138 .. 0.49

  Alignments for each domain:
  == domain 1  score: 47.8 bits;  conditional E-value: 5.2e-17
  COX24_C   1 adSVlrKRrkKMkKHKyKKlrKrtRalrrrlg 32 
              +++Vl++Rr+KM++HKy+Kl K+tR+lrr+++
   Q6PI41  90 CKNVLKIRRRKMNHHKYRKLVKKTRFLRRKVQ 121
              89****************************85 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.45
  COX24_C  18 KKlrKr 23 
              +K  K 
   Q6PI41 127 RKQIKF 132
              444444 PP



Or compare Q6PI41 to CDD or PaperBLAST