PaperBLAST – Find papers about a protein or its homologs

 

Align XP_001209950.1 to PF08550 (DUF1752)

XP_001209950.1 has 817 amino acids

Query:       DUF1752  [M=28]
Accession:   PF08550.10
Description: Fungal protein of unknown function (DUF1752)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-16   46.8   2.2    2.1e-16   45.8   2.2    1.5  1  XP_001209950.1  


Domain annotation for each sequence (and alignments):
>> XP_001209950.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   2.2   2.1e-16   2.1e-16       1      28 []      58      85 ..      58      85 .. 0.97

  Alignments for each domain:
  == domain 1  score: 45.8 bits;  conditional E-value: 2.1e-16
         DUF1752  1 lWkyytkkkkdlpngeRLENlSWRlWnk 28
                    +Wk+y+++k +lpn+eR+ENl+WR++++
  XP_001209950.1 58 IWKLYSRTKAQLPNQERMENLTWRMMAM 85
                    7*************************96 PP



Or compare XP_001209950.1 to CDD or PaperBLAST