PaperBLAST – Find papers about a protein or its homologs

 

Align XP_002549534.1 to PF08550 (DUF1752)

XP_002549534.1 has 589 amino acids

Query:       DUF1752  [M=28]
Accession:   PF08550.10
Description: Fungal protein of unknown function (DUF1752)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-15   42.9   3.7    4.5e-15   41.6   3.7    1.8  1  XP_002549534.1  


Domain annotation for each sequence (and alignments):
>> XP_002549534.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   3.7   4.5e-15   4.5e-15       1      27 [.      66      92 ..      66      93 .. 0.97

  Alignments for each domain:
  == domain 1  score: 41.6 bits;  conditional E-value: 4.5e-15
         DUF1752  1 lWkyytkkkkdlpngeRLENlSWRlWn 27
                    lWk+y++++ +lp+++R+ENl+WR+++
  XP_002549534.1 66 LWKMYNRARESLPYQARMENLTWRMMY 92
                    8*************************7 PP



Or compare XP_002549534.1 to CDD or PaperBLAST