PaperBLAST – Find papers about a protein or its homologs

 

Align Q1D006 to PF08551 (DUF1751)

Q1D006 has 242 amino acids

Query:       DUF1751  [M=99]
Accession:   PF08551.14
Description: Eukaryotic integral membrane protein (DUF1751)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-11   30.7   1.8    2.8e-11   30.2   1.0    1.7  2  Q1D006    


Domain annotation for each sequence (and alignments):
>> Q1D006  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   1.0   2.8e-11   2.8e-11       6      71 ..      59     124 ..      52     152 .. 0.87
   2 ?   -2.0   0.0       0.3       0.3      79      95 ..     155     174 ..     127     176 .. 0.57

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 2.8e-11
  DUF1751   6 pypwtlltasfvelnvfkvlvslltLllggkylErlWgskEllkFilvvnvitnllvvlltlllyl 71 
               y w  lt +f+e++ +++++ +++ + +g ylE++Wgs+ ll   l ++v+++l++ ll++l+  
   Q1D006  59 LYLWQPLTYAFIESSPIGIIFGAIITWSIGGYLESIWGSRRLLMVALGIAVSAGLITSLLAMLVPG 124
              39******************************************************9999988755 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.3
  DUF1751  79 ll.vplsGl..igilvgflv 95 
               + +plsG+  +gi +gf+v
   Q1D006 155 FWgLPLSGNalAGIGAGFVV 174
              33466666522467777766 PP



Or compare Q1D006 to CDD or PaperBLAST