PaperBLAST – Find papers about a protein or its homologs

 

Align WP_011046801.1 to PF08592 (DUF1772)

WP_011046801.1 has 169 amino acids

Query:       DUF1772  [M=137]
Accession:   PF08592.11
Description: Domain of unknown function (DUF1772)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.8e-20   57.8  10.9      1e-19   57.4  10.9    1.2  1  WP_011046801.1  


Domain annotation for each sequence (and alignments):
>> WP_011046801.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.4  10.9     1e-19     1e-19       1     136 [.      21     156 ..      21     157 .. 0.73

  Alignments for each domain:
  == domain 1  score: 57.4 bits;  conditional E-value: 1e-19
         DUF1772   1 GlilafslfvvPallslpasssl......llkqwrrlfkrgkavfpp..lallsalafa.ylaaraasrgarllylaaaallllsivpyTllvmv 86 
                     G++lafs f++ al+ ++a+              r++f   + vf +  l++++++af+ + +a   + g   l+l++a+++l++ + +T++++v
  WP_011046801.1  21 GVFLAFSDFIMRALALTSATGGIeamqviN----REVF---RWVFMTlfLGMAAISAFImVHSALYLAGGPGTLILVGALVYLFGCFAITVIFNV 108
                     99*************999777557655531....2233...2223332466666666664444556667777777777888************** PP

         DUF1772  87 PtNnkLaalk.eedakekedeaevrelle..rWgrlnlvRavlalaaavlgll 136
                     P+N++La ++ +++       ++ +   +  rW+ +n++R++++++aa ++l+
  WP_011046801.1 109 PMNQALADMDlSAE-----ATRDFWTGTYlpRWTMWNTIRMLACILAATMMLF 156
                     *********84443.....345566555577******************9986 PP



Or compare WP_011046801.1 to CDD or PaperBLAST