PaperBLAST – Find papers about a protein or its homologs

 

Align WP_005477438.1 to PF08719 (NADAR)

WP_005477438.1 has 353 amino acids

Query:       NADAR  [M=163]
Accession:   PF08719.15
Description: NADAR domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.9e-42  130.4   0.0    6.3e-42  129.8   0.0    1.3  1  WP_005477438.1  


Domain annotation for each sequence (and alignments):
>> WP_005477438.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.8   0.0   6.3e-42   6.3e-42       1     163 []       6     145 ..       6     145 .. 0.95

  Alignments for each domain:
  == domain 1  score: 129.8 bits;  conditional E-value: 6.3e-42
           NADAR   1 fFykeeeepygvfsnfspseftvegeeesvkleeltyptaehymmaqKallfkdeeaaekilaakspkeakalgrkvrnfdeedWeevkeevvee 95 
                     +Fy++ +ep+g++snf ++++++++++         +pt+ehy++aqK   f d + ++ki++a+sp ea al+r+ ++  ++dW++ k +v+  
  WP_005477438.1   6 LFYEP-DEPHGFLSNFCHAPVEISSQS---------WPTSEHYYQAQK---FVDAQLQTKIQKAQSPDEAFALSRQYEHLVRSDWDNMKLSVMAF 87 
                     59999.55*********8888777777.........************...***********999****************************** PP

           NADAR  96 gnlaKFtqneelrelLlaTgdreLveasprDriWGiGlkaddaaenrekwkGeNlLGkaLmevReeLr 163
                     ++ +KF qn++l ++L++Tg++ L e+s +D++WG G   d        +kG N+LG++Lm+vR+eLr
  WP_005477438.1  88 IVREKFLQNPKLAQKLMRTGNACLTEHSHKDAFWGDG--GD--------GKGLNHLGEILMNVRAELR 145
                     *************************************..67........88***************97 PP



Or compare WP_005477438.1 to CDD or PaperBLAST