NP_055102.3 has 1222 amino acids
Query: EMC7_beta-sandw [M=122] Accession: PF09430.14 Description: ER membrane protein complex subunit 7, beta-sandwich domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.2e-26 79.5 0.4 2.3e-11 30.2 0.0 7.7 8 NP_055102.3 Domain annotation for each sequence (and alignments): >> NP_055102.3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -0.2 0.0 0.061 0.061 27 60 .. 74 108 .. 52 128 .. 0.82 2 ! 10.0 0.0 4.1e-05 4.1e-05 8 68 .. 145 209 .. 139 230 .. 0.74 3 ! 10.2 0.0 3.6e-05 3.6e-05 23 43 .. 271 291 .. 262 302 .. 0.88 4 ! 30.2 0.0 2.3e-11 2.3e-11 7 63 .. 344 397 .. 339 409 .. 0.85 5 ! 4.2 0.0 0.0026 0.0026 6 49 .. 425 470 .. 420 473 .. 0.71 6 ! 4.4 0.0 0.0023 0.0023 30 60 .. 544 576 .. 519 599 .. 0.80 7 ! 8.3 0.0 0.00014 0.00014 21 74 .. 904 959 .. 885 987 .. 0.75 8 ? -1.3 0.0 0.13 0.13 23 48 .. 995 1021 .. 985 1062 .. 0.86 Alignments for each domain: == domain 1 score: -0.2 bits; conditional E-value: 0.061 EMC7_beta-sandw 27 kDGsFvfrdvpegsYvLevesp.dleFepvrVdvk 60 ++G F+++ +g ++L++e p + Fep V+ NP_055102.3 74 NNGYFMIPLYDKGDFILKIEPPlGWSFEPTTVELH 108 6899***************9875899999998866 PP == domain 2 score: 10.0 bits; conditional E-value: 4.1e-05 EMC7_beta-sandw 8 antrvll.dsgsh..kfkvpvrkDGsFvfrdvpegsYvLevespdleFepvrVdvk.kkgkarar 68 a+++v+l ++g++ +++++ G+F+f +v g Y + + +p+ + ++ +v+ + +a+a NP_055102.3 145 AGVQVSLrNTGTEakIQSTVTQPGGKFAFFKVLPGDYEILATHPTWALKEASTTVRvTNSNANAA 209 6788999755555524467888899***********************99655555324444444 PP == domain 3 score: 10.2 bits; conditional E-value: 3.6e-05 EMC7_beta-sandw 23 vpvrkDGsFvfrdvpegsYvL 43 ++ r+DGsF+f +p+g Y++ NP_055102.3 271 TVSREDGSFSFYSLPSGGYTV 291 6789***************97 PP == domain 4 score: 30.2 bits; conditional E-value: 2.3e-11 EMC7_beta-sandw 7 lantrvlldsgshkfkvpvrkDGsFvfrdvpegsYvLevespdleFepvrVdvkkkg 63 ++++ v+l+++ + v+++ DGsF ++++ g+Y++++++ l Fe+v +++ ++ NP_055102.3 344 VPEAVVTLNNQIK---VKTKADGSFRLENITTGTYTIHAQKEHLYFETVTIKIAPNT 397 5677889977766...*************************************9554 PP == domain 5 score: 4.2 bits; conditional E-value: 0.0026 EMC7_beta-sandw 6 llantrvlldsgsh.kfkvpvrkD..GsFvfrdvpegsYvLevespd 49 ++++ +v+l+s+ + k v v++D GsF f+ + g+Y ++v p+ NP_055102.3 425 QMNKYKVVLSSQDKdKSLVTVETDahGSFCFK-AKPGTYKVQVMVPE 470 5677889996665555555555553499**97.689*****998776 PP == domain 6 score: 4.4 bits; conditional E-value: 0.0023 EMC7_beta-sandw 30 sFvfrdvpegsYvLevespdleFep..vrVdvk 60 +F+f +v g+Y + + + d +++ + V+v NP_055102.3 544 TFTFDNVLPGKYKISIMHEDWCWKNksLEVEVL 576 8*******************9998855666666 PP == domain 7 score: 8.3 bits; conditional E-value: 0.00014 EMC7_beta-sandw 21 fkvpvrkDGsFvfrdvpegsYvLevespdleFep..vrVdvkkkgkararkltive 74 + ++ +G +f++++ g+Y+ + +++Fep ++v++ ++ + ++ + + NP_055102.3 904 SNLLTQDNGILTFSNLSPGQYYFKPMMKEFRFEPssQMIEVQEGQNLKITITGYRT 959 55678889**************************6666888866666555555555 PP == domain 8 score: -1.3 bits; conditional E-value: 0.13 EMC7_beta-sandw 23 vpvrkDGsFvfrdvpeg.sYvLevesp 48 +++ ++G+F +r + g Y++++++ NP_055102.3 995 TVTDEEGKFRLRGLLPGcVYHVQLKAE 1021 688999******998887899888765 PP
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