PaperBLAST – Find papers about a protein or its homologs

 

Align O94694 to PF09430 (EMC7_beta-sandw)

O94694 has 189 amino acids

Query:       EMC7_beta-sandw  [M=122]
Accession:   PF09430.14
Description: ER membrane protein complex subunit 7, beta-sandwich domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-32   98.1   0.1      3e-32   97.6   0.1    1.2  1  O94694    


Domain annotation for each sequence (and alignments):
>> O94694  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.6   0.1     3e-32     3e-32       2     122 .]      38     154 ..      37     154 .. 0.90

  Alignments for each domain:
  == domain 1  score: 97.6 bits;  conditional E-value: 3e-32
  EMC7_beta-sandw   2 kpnnllantrvlldsgshkfkvpvrkDGsFvfrdvpegsYvLevespdleFepvrVdvkkkgkararkltivetaevvqleekgneesyplkik 95 
                      k+n l+++tr+ l s+ ++f+++v++DGsF+f++vp++ Y+L++es+d+eF+++++ ++       +  ++ ++ae  +++ + +++syp+k++
           O94694  38 KINLLSYDTRARLISSNKTFETVVERDGSFTFPNVPDEIYFLRLESIDYEFSEFHIIIN----ESIVYPYYTSPAEKRPASSTAKNTSYPIKVR 127
                      6788999******777779****************************************....4455566777777777777777799****** PP

  EMC7_beta-sandw  96 avarreYfeerekfsilslLksPmvLm 122
                      av +r+Y++e +kfs+++lLksPm+L+
           O94694 128 AVLKRDYLKEPRKFSLIRLLKSPMMLL 154
                      *************************97 PP



Or compare O94694 to CDD or PaperBLAST