XP_002662361.1 has 1208 amino acids
Query: EMC7_beta-sandw [M=122]
Accession: PF09430.14
Description: ER membrane protein complex subunit 7, beta-sandwich domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.5e-22 65.6 2.0 2.5e-11 30.1 0.0 7.7 8 XP_002662361.1
Domain annotation for each sequence (and alignments):
>> XP_002662361.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 0.8 0.0 0.03 0.03 28 60 .. 66 99 .. 41 118 .. 0.81
2 ! 5.2 0.0 0.0012 0.0012 8 62 .. 136 194 .. 129 222 .. 0.72
3 ! 9.8 0.0 4.8e-05 4.8e-05 25 44 .. 264 283 .. 252 310 .. 0.85
4 ! 30.1 0.0 2.5e-11 2.5e-11 7 64 .. 335 389 .. 330 401 .. 0.86
5 ? -0.2 0.0 0.061 0.061 11 49 .. 421 462 .. 411 466 .. 0.67
6 ! 3.1 0.0 0.0059 0.0059 30 60 .. 536 566 .. 512 582 .. 0.84
7 ! 5.6 0.0 0.00097 0.00097 23 60 .. 892 929 .. 876 973 .. 0.78
8 ? -1.3 0.0 0.13 0.13 22 46 .. 980 1005 .. 972 1053 .. 0.87
Alignments for each domain:
== domain 1 score: 0.8 bits; conditional E-value: 0.03
EMC7_beta-sandw 28 DGsFvfrdvpegsYvLevesp.dleFepvrVdvk 60
+G F+++ +g +vL++e p + Fep Vd
XP_002662361.1 66 NGYFMIPLYDKGDFVLKIEPPsGWSFEPTTVDLH 99
799****************984689***999976 PP
== domain 2 score: 5.2 bits; conditional E-value: 0.0012
EMC7_beta-sandw 8 antrvll.....dsgshkfkvpvrkDGsFvfrdvpegsYvLevespdleFepvrVdvk.kk 62
a+++v+l d+ +v++ G+++f +v gsY + + + + + e+ v+ ++
XP_002662361.1 136 AGVEVSLrkageDAV--LQSVFTHAGGQYTFLKVLPGSYDITASHSSWTLEQSSTAVVvSN 194
666777765332222..34899************************999998655555323 PP
== domain 3 score: 9.8 bits; conditional E-value: 4.8e-05
EMC7_beta-sandw 25 vrkDGsFvfrdvpegsYvLe 44
r+DG+F+f+ +p+g+Y++
XP_002662361.1 264 SREDGTFSFPCLPSGEYTVV 283
599**************985 PP
== domain 4 score: 30.1 bits; conditional E-value: 2.5e-11
EMC7_beta-sandw 7 lantrvlldsgshkfkvpvrkDGsFvfrdvpegsYvLevespdleFepvrVdvkkkgk 64
+a++ v+l+++ + v +++DGsF ++++ g+Y+++ ++ ++Fepv V++ ++
XP_002662361.1 335 VADAVVTLNNQIK---VETKEDGSFRLENMTTGTYTINTHKELMFFEPVTVKIAPSTP 389
6778899977777...*************************************96654 PP
== domain 5 score: -0.2 bits; conditional E-value: 0.061
EMC7_beta-sandw 11 rvlldsgsh..kfkvpvrkD..GsFvfrdvpegsYvLevespd 49
+v+l+++ + f v++D G F f+ v+ g Y ++v p+
XP_002662361.1 421 KVTLSAQRQdqGFFRTVESDshGAFCFQ-VKPGDYSVQVTLPE 462
5666444333234455555533889995.9*******998776 PP
== domain 6 score: 3.1 bits; conditional E-value: 0.0059
EMC7_beta-sandw 30 sFvfrdvpegsYvLevespdleFepvrVdvk 60
+F+f +v g+Y + + + + ++ V++
XP_002662361.1 536 TFTFGNVLPGKYKVSITQEEWCWKHKSVEID 566
7******************999988666664 PP
== domain 7 score: 5.6 bits; conditional E-value: 0.00097
EMC7_beta-sandw 23 vpvrkDGsFvfrdvpegsYvLevespdleFepvrVdvk 60
++ G +f++++ g+Y+ + +++Fep + ++
XP_002662361.1 892 LLTQDTGLLTFNNLSPGQYYFKPMMKEFRFEPSAQMIT 929
445566899**********************9654444 PP
== domain 8 score: -1.3 bits; conditional E-value: 0.13
EMC7_beta-sandw 22 kvpvrkDGsFvfrdvpeg.sYvLeve 46
+++ ++G F +r + g +Y+++++
XP_002662361.1 980 DTVTDEEGRFRLRGLRPGcNYNIQLR 1005
6789999********99988988775 PP
Or compare XP_002662361.1 to CDD or PaperBLAST