PaperBLAST – Find papers about a protein or its homologs

 

Align Q9ESJ4 to PF09431 (SPIN90_LRD)

Q9ESJ4 has 714 amino acids

Query:       SPIN90_LRD  [M=137]
Accession:   PF09431.14
Description: SPIN90/Ldb17, leucine-rich domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-39  121.2   0.2    3.4e-39  120.3   0.2    1.5  1  Q9ESJ4    


Domain annotation for each sequence (and alignments):
>> Q9ESJ4  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.3   0.2   3.4e-39   3.4e-39       2     136 ..     540     674 ..     539     675 .. 0.97

  Alignments for each domain:
  == domain 1  score: 120.3 bits;  conditional E-value: 3.4e-39
  SPIN90_LRD   2 defnysviklllalneqymvaslsskelenkvlkvlsekkkssktfteklllllNReedpvlql........lilkllylifttketaelfYtnDlkVL 92 
                 +++ + +++lllaln +++  +      +n ++ +ls +++++k f+eklllllNR +dpv  +        ++lk+l+++f++++ta +fY++D++ L
      Q9ESJ4 540 EQLPDLCMNLLLALNLHLTAPE------QNVIMAALS-RHTNVKIFSEKLLLLLNRGDDPVRIFrhepqpphSVLKFLQDVFSSSATAAIFYHTDMMAL 631
                 78899***************99......9********.*************************9*********************************** PP

  SPIN90_LRD  93 vDvliRelsdlseeeeklrhtyLrvlepllkntqlsetkykkee 136
                 +D+++R+++dls +++klr++yL+++++++++t + +++++ ++
      Q9ESJ4 632 IDITVRQIADLS-PGDKLRMEYLSLMHAVVRSTPYLQHRHRLSD 674
                 ************.****************************987 PP



Or compare Q9ESJ4 to CDD or PaperBLAST