biolip::5o1lA has 375 amino acids
Query: MPAB_Lcp_cat [M=230]
Accession: PF09995.13
Description: ER-bound oxygenase mpaB/B'/Rubber oxygenase, catalytic domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.6e-19 56.3 2.0 2.6e-19 56.3 2.0 1.6 2 biolip::5o1lA
Domain annotation for each sequence (and alignments):
>> biolip::5o1lA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.1 0.1 0.17 0.17 195 217 .. 59 84 .. 21 96 .. 0.50
2 ! 56.3 2.0 2.6e-19 2.6e-19 11 221 .. 105 323 .. 99 333 .. 0.83
Alignments for each domain:
== domain 1 score: -2.1 bits; conditional E-value: 0.17
MPAB_Lcp_cat 195 altvgllpprlrellglp...wtard 217
++ g lp lre + ++ +d
biolip::5o1lA 59 QALPGGLPGDLREFMEHArrmPSWAD 84
44444455555555544444444444 PP
== domain 2 score: 56.3 bits; conditional E-value: 2.6e-19
MPAB_Lcp_cat 11 llgglralllqalhplvgaGvadhsrfadplgRlrrTltyvatvtygt....geeaealaerVrrlHarvrgtd........dsgrrygaldpell 94
l gl +l+ ++ p+ ++v + ad+ +R++ T++ + + + + +a++ r +Ha+vr+ +sg + ++++++
biolip::5o1lA 105 LY-GLGSGLMSTAIPRESRAVYYSKGGADMKDRIAKTARLGYDIGDLDaylpHGSMIVTAVKTRMVHAAVRHLLpqspawsqTSGGQKIPISQADI 199
44.478888889********995556699**********9999876446666666999*************885533334444556777******* PP
MPAB_Lcp_cat 95 lwvhatlvdsfldayerfvgpltdaeaeryyaewrrvgrllgvpprdvpatraefeaywdamlrpelevtpearellddlrklpaplrillarplg 190
+ ++ l +++ ++ ++ +++ a+ae+y++ w + +++lgv+++ +pat++++ a ++l+p l+ tpe +l++ l + a l a + +
biolip::5o1lA 200 MVTWHSLATFVMRKMKQWGVRVNTADAEAYLHVWQVSAHMLGVSDEYIPATWDAANAQSKQVLDPILAHTPEGEALTEVLLGIVAELD---AGLTR 292
******************888*******************************************************666644444444...7789* PP
MPAB_Lcp_cat 191 rllraltvgllpprlrellglpwtarderrl 221
+l+ a+++ +l+ ++ ++ gl ++ er
biolip::5o1lA 293 PLIGAFSRYTLGGEVGDMIGLAKQPVLERLI 323
*********************9655555543 PP
Or compare biolip::5o1lA to CDD or PaperBLAST