NP_611900.1 has 587 amino acids
Query: NDNF [M=127] Accession: PF10179.13 Description: Neuron-derived neurotrophic factor, first Fn(III) domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.3e-37 113.6 0.0 1.1e-34 105.5 0.0 2.5 2 NP_611900.1 Domain annotation for each sequence (and alignments): >> NP_611900.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 105.5 0.0 1.1e-34 1.1e-34 1 126 [. 208 332 .. 208 333 .. 0.97 2 ! 5.7 0.0 0.00082 0.00082 2 25 .. 473 493 .. 472 536 .. 0.80 Alignments for each domain: == domain 1 score: 105.5 bits; conditional E-value: 1.1e-34 NDNF 1 vtlkWkpsksvldkhaveYClvvnreh......nykslCaaeeeirkekqeekeskskkeavlellkeqelkkerkleekessadlqivCvgkktvqt 92 +++kW++sk +d h ++YClv++r + ++++C+a+++++++++ +++++++ le ++ +++++er+l+++ ++++ivC+gk+++q+ NP_611900.1 208 MIVKWERSK--FDFHVMHYCLVIQRLSmdtprmIFTNFCQAVSAYTDQQP--MTPSCAAGGPLEGIWGAPPQRERRLNPR---QNVHIVCTGKRRQQL 298 689******..**************99999*99************99988..999*************************...*************** PP NDNF 93 vseLkpdtqYyfdvFavdqkrntstaylgtfaet 126 +++L+p+++Y++d+F+++q r+++t+ l++++++ NP_611900.1 299 LRRLLPRSSYHLDLFGIHQGRQNLTLRLASSQVN 332 *****************************99976 PP == domain 2 score: 5.7 bits; conditional E-value: 0.00082 NDNF 2 tlkWkpsksvldkhaveYClvvnr 25 t++W+ s+ d+++ YC++v + NP_611900.1 473 TIAWNGSP---DERELSYCIIVFN 493 89******...*********9954 PP
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