SwissProt::F1QPX0 has 574 amino acids
Query: NDNF [M=127]
Accession: PF10179.13
Description: Neuron-derived neurotrophic factor, first Fn(III) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.5e-45 139.9 0.4 2.3e-41 127.0 0.0 2.7 2 SwissProt::F1QPX0
Domain annotation for each sequence (and alignments):
>> SwissProt::F1QPX0
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 127.0 0.0 2.3e-41 2.3e-41 1 127 [] 192 340 .. 192 340 .. 0.90
2 ! 9.7 0.8 4.8e-05 4.8e-05 87 124 .. 532 568 .. 477 571 .. 0.74
Alignments for each domain:
== domain 1 score: 127.0 bits; conditional E-value: 2.3e-41
NDNF 1 vtlkWkpsksv.ldkhaveYClvvnrehnykslCaaeeei..rkekq....eekeskskkeavlel.lkeqelkkerkleekes...s.... 77
vtl+Wkp+++ ++ ++++YC+v+n+ehn+kslCaae+++ +++++ +++ + +++a + + +e++++k+r l+ +++ +
SwissProt::F1QPX0 192 VTLAWKPTPTGsVMGQPIQYCVVINKEHNFKSLCAAEAKMslDDAFMiapkPGRDFSPFDFAYFGFvPSENDFHKDRFLTTNRAlsnKmsra 283
79*******99*****************************6656666999999************945677788888887777676515577 PP
NDNF 78 .......adlqivCvgkktvqtvseLkpdtqYyfdvFavdqkrntstaylgtfaetl 127
ad+q++C+g+k+ +t+++LkpdtqYyfdvFav++ +n stay+gtfa+t+
SwissProt::F1QPX0 284 yipkpkvADIQKICIGNKNIFTITDLKPDTQYYFDVFAVNTGTNMSTAYVGTFARTK 340
8888999***********************************************985 PP
== domain 2 score: 9.7 bits; conditional E-value: 4.8e-05
NDNF 87 kktvqtvseLkpdtqYyfdvFavdqkrntstaylgtfa 124
t t+++L+ ++Y +dv++v + ++ s+ y +
SwissProt::F1QPX0 532 AVTTETITGLEAGKSYLLDVYVVGH-SGHSVKYQSKLV 568
45789******************75.677777776655 PP
Or compare SwissProt::F1QPX0 to CDD or PaperBLAST