XP_058975262.1 has 692 amino acids
Query: NDNF [M=127]
Accession: PF10179.13
Description: Neuron-derived neurotrophic factor, first Fn(III) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-32 98.1 0.4 9.8e-31 92.7 0.1 2.5 2 XP_058975262.1
Domain annotation for each sequence (and alignments):
>> XP_058975262.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 92.7 0.1 9.8e-31 9.8e-31 1 125 [. 307 428 .. 307 430 .. 0.87
2 ! 3.2 0.0 0.0048 0.0048 2 38 .. 570 610 .. 569 643 .. 0.73
Alignments for each domain:
== domain 1 score: 92.7 bits; conditional E-value: 9.8e-31
NDNF 1 vtlkWkpsksvldkhaveYClvvnrehnykslCaaeeeirkekq...eekeskskkeavlellkeqelkkerkleekessadlqivCvgkktvqt 92
+++kW +sk +d hav+YClvv++++ k +C+a+ e ++ + ++ + ++++ + e + ++++++++k++++ ++++C+g++t+q+
XP_058975262.1 307 MIVKWDKSK--FDSHAVQYCLVVSTRNAHKDFCQAVDEFLTSPSanrRNSMGVCQQPLTIESILSRPAERAKKIDPH----TTNVICTGSRTHQL 395
689******..***************************944444445666777788888888888888888888877....9************* PP
NDNF 93 vseLkpdtqYyfdvFavdqkrntstaylgtfae 125
+++L p+ +Y++dvF++++kr+++t+ +++++
XP_058975262.1 396 IRGLAPNYEYFLDVFGIHTKRQNLTFHIASSTI 428
**************************9998875 PP
== domain 2 score: 3.2 bits; conditional E-value: 0.0048
NDNF 2 tlkWkpsksvldkhaveYClvvnreh.......nykslCaaeee 38
+++W s+ + + YC++v + y++ C +
XP_058975262.1 570 KIAWYSSP---EIRTLSYCIIVFNLPqrnrssiDYTNYCMDFGK 610
68999999...88999****995544455577788888876555 PP
Or compare XP_058975262.1 to CDD or PaperBLAST