PaperBLAST – Find papers about a protein or its homologs

 

Align P46992 to PF10287 (DUF2401)

P46992 has 396 amino acids

Query:       DUF2401  [M=229]
Accession:   PF10287.9
Description: Putative TOS1-like glycosyl hydrolase (DUF2401)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-87  278.2   1.4    3.9e-87  277.7   1.4    1.2  1  P46992    


Domain annotation for each sequence (and alignments):
>> P46992  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  277.7   1.4   3.9e-87   3.9e-87       1     228 [.     105     338 ..     105     339 .. 0.96

  Alignments for each domain:
  == domain 1  score: 277.7 bits;  conditional E-value: 3.9e-87
  DUF2401   1 gswkrvayYnaesgtaenlvFlnnkggksgsGvfdsalgnslsyassdgtsgassptvledvll.ssnkEiiifsdkkCe....dkdCgyyregivayhGfg 97 
              ++w+r ayY+++s+ta+n++Fln+ g+ s       +lgn+lsyass+gt++as++tvl+d +l ss++E+ii+s+ +C     dk Cg+yr+gi+ay+G+g
   P46992 105 SDWNRLAYYESSSKTADNVTFLNHGGEASP------CLGNALSYASSNGTGSASEATVLADGTLiSSDQEYIIYSNVSCPksgyDKGCGVYRSGIPAYYGYG 200
              58************************9777......***********************987665***************9999****************** PP

  DUF2401  98 Gakkvflfefsmpedkksssn....kdmPAiWlLnakiprtaqYpgnaeCsCwksgCGelDifEvlesg.seklkstlhtaqgae....gggssdyfeRptd 190
              G++k+flfef+mp++++++s+    +d+PAiWlLn++i+rt+qYp+na+CsCw+sgCGe+DifE ++ + +++l+st+ht+qg+e    g++s  y++R+t+
   P46992 201 GTTKMFLFEFEMPTETEKNSSsigyYDLPAIWLLNDHIARTSQYPTNANCSCWASGCGEYDIFEAMNGTeKNHLYSTFHTFQGIEdlgtGIQSYGYITRNTT 302
              **************99998877999******************************************9989*************99*9999*********** PP

  DUF2401 191 etikvavvfdseestvkivelddstdfdeslsaetves 228
              +t+k++vvfds++  + +++++d t f+ ++sa+tv++
   P46992 303 GTMKGGVVFDSSG--NVVSFISDATPFNGTVSADTVND 338
              *************..99*******************97 PP



Or compare P46992 to CDD or PaperBLAST