PaperBLAST – Find papers about a protein or its homologs

 

Align D0N3P2 to PF10290 (YJL171C_Tos1_N)

D0N3P2 has 488 amino acids

Query:       YJL171C_Tos1_N  [M=63]
Accession:   PF10290.13
Description: Cell wall protein YJL171C/Tos1, N-terminal
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-14   40.2   0.5    8.6e-14   38.1   0.1    2.4  2  D0N3P2    


Domain annotation for each sequence (and alignments):
>> D0N3P2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   0.1   8.6e-14   8.6e-14      10      62 ..     196     244 ..     186     245 .. 0.94
   2 ?   -2.3   0.0      0.36      0.36      10      26 ..     248     264 ..     247     282 .. 0.57

  Alignments for each domain:
  == domain 1  score: 38.1 bits;  conditional E-value: 8.6e-14
  YJL171C_Tos1_N  10 fsGsYkevtsmdessgsCeveeksfsGplaPldeelSvhfRGPlkLkqfavYt 62 
                     + GsY++vt++     +C++e+ +++ p++P++e  S+ fRGP ++ ++avY+
          D0N3P2 196 MPGSYNRVTDLA----TCTKEPVQVNSPVGPMSEPCSMIFRGPQEIFNIAVYS 244
                     68**********....8***********************************7 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.36
  YJL171C_Tos1_N  10 fsGsYkevtsmdessgs 26 
                     ++Gs+ +v+s ++++g+
          D0N3P2 248 GNGSWPRVSSYSSKDGT 264
                     56777777777666553 PP



Or compare D0N3P2 to CDD or PaperBLAST