PaperBLAST – Find papers about a protein or its homologs

 

Align P46992 to PF10290 (DUF2403)

P46992 has 396 amino acids

Query:       DUF2403  [M=63]
Accession:   PF10290.9
Description: Glycine-rich protein domain (DUF2403)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.6e-28   83.3   0.0    2.7e-27   81.4   0.0    2.1  2  P46992    


Domain annotation for each sequence (and alignments):
>> P46992  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.4   0.0   2.7e-27   2.7e-27       2      63 .]      27      93 ..      26      93 .. 0.95
   2 ?   -3.1   0.0      0.62      0.62      34      46 ..     320     332 ..     316     333 .. 0.78

  Alignments for each domain:
  == domain 1  score: 81.4 bits;  conditional E-value: 2.7e-27
  DUF2403  2 aitytnvggsGsYkeVtsmdes....sgeCeteeks.fsGplaPldeelSvhfRGPlkLkqfavYtp 63
             ++++tnvg++GsY +V+++++     s++Ce+ ++  fsG++aPl ++lSvhfRGPlkLkqfa+Yt+
   P46992 27 KLDFTNVGFTGSYVDVNKFKDItnneSCTCEVGDRVwFSGKNAPLADYLSVHFRGPLKLKQFAFYTS 93
             789****************9888889*******9999****************************85 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.62
  DUF2403  34 fsGplaPldeelS 46 
              f  + +P++  +S
   P46992 320 FISDATPFNGTVS 332
              6677899999998 PP



Or compare P46992 to CDD or PaperBLAST