NP_001018404.3 has 579 amino acids
Query: Iml2-TPR_39 [M=467]
Accession: PF10300.13
Description: Iml2/Tetratricopeptide repeat protein 39
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.4e-123 396.3 1.7 1.1e-122 396.0 1.7 1.1 1 NP_001018404.3
Domain annotation for each sequence (and alignments):
>> NP_001018404.3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 396.0 1.7 1.1e-122 1.1e-122 2 467 .] 27 494 .. 26 494 .. 0.89
Alignments for each domain:
== domain 1 score: 396.0 bits; conditional E-value: 1.1e-122
Iml2-TPR_39 2 aaldlfLnnkfeeaeellkeaskeSmyhalgrsvvafleAvltfepedikkasealkeaekvceksrkkaqvve.........vskqst...sds 84
++++++Lnn f+e++el++ ++++S ++++g+s+v+fl+A++tfe+e++++as++l+++ek+ce +++a+v+e + s
NP_001018404.3 27 QGINMLLNNGFRESDELFRRYRTHSPLMSFGASFVSFLNAMMTFEEEKMQMASDDLRTTEKLCE--SDNAGVIEtirnkikksM----DsgrSGV 115
79**************************************************************..778888886666644331....2222223 PP
Iml2-TPR_39 85 lyeeeleaevcyaealLlkAaltfvdeslvefiKgglklrkaYqiykeiqkllkkleekkek...........eeeesslseekn.........q 159
+l+ ++++a+++++ A+l+fv+++l ++iKgg+ lrka+++y+++++ +++l+e+ ++ + ++++n +
NP_001018404.3 116 EIVDRLQRQIIVADCQVYLAVLSFVKQELSAYIKGGWILRKAWKMYNKCYSDISQLQEACRRrssdqqgalasD------QANHNtstgsggrvT 204
345789**************************************************998888677665544331......222225567788889 PP
Iml2-TPR_39 160 eeidefiesGvklglGifnlllSllPpkilklLevvGFsGdreeGLrlLweaaksknlraalalltLlaYytvvvqvlgie..egeapleeaeel 252
+e+ ++++ v++g+G+f+l++S++Pp++lk+ +++GF Gdr++GL +L +a++sk+++a+la+l+Ll+Y+tvv+ +++++ + a l ea+++
NP_001018404.3 205 DEVLDRLKGSVSFGYGLFHLCISMVPPHLLKIVNLLGFPGDRHQGLASLAYASESKDMKAPLATLALLWYHTVVQPFFALDgsDSRAGLLEAKAI 299
9*******************************************************************************53347999******* PP
Iml2-TPR_39 253 LkklrkryPkgallllfeariellkgnldeAlelleeliesqselkqvhhlcyfelalclvflhkykqaansallLvkeskwSkalYtYlkaacl 347
L+k yP+++l+++f++r+++l++++++Al+++++++e +s++++++h+c++e+ +c++++ +++a++s+++L +es+wS+++Y+Yl+++c+
NP_001018404.3 300 LQKKAMVYPNSSLFIFFKGRVQRLECQINSALASFQDALEFASDQREIQHVCLYEIGWCSMIEMSFEDAFRSFERLKNESRWSQCYYAYLTGVCQ 394
*********************************************************************************************** PP
Iml2-TPR_39 348 lelykeeekkeakekavellrevpklkqkiagkslplekFaarKvqrfkarakvdavlvvpllEliYvwngfsrmgkkelltesvlkllekaeka 442
+ ++ e a+ ++r v+kl+++ k++++e+Fa+++++++++ ++++ + E++Y+w+++ +++ +l+ + ++l+
NP_001018404.3 395 GASGDL-------EGAKGVFRDVQKLFKR---KNNQIEQFALKRAEKLRKVSLTRELCILGVVEVLYLWKALPNCSSSKLQ--LMNQVLQ----- 472
*99987.......778999**********...******************977779**********************999..3333322..... PP
Iml2-TPR_39 443 nkeseaeeDdks...llkLLkglvlrnl 467
+ Dd+s l++LL g++ ++l
NP_001018404.3 473 ------GLDDQSsigLKHLLLGAIQKCL 494
......2344443559*******99987 PP
Or compare NP_001018404.3 to CDD or PaperBLAST