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Align NP_001326116.1 to PF10350 (DUF2428)

NP_001326116.1 has 2130 amino acids

Query:       DUF2428  [M=259]
Accession:   PF10350.13
Description: THADA/TRM732, DUF2428
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-75  239.3   0.1    4.6e-75  238.3   0.1    1.6  1  NP_001326116.1  


Domain annotation for each sequence (and alignments):
>> NP_001326116.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  238.3   0.1   4.6e-75   4.6e-75       3     259 .]     992    1311 ..     990    1311 .. 0.90

  Alignments for each domain:
  == domain 1  score: 238.3 bits;  conditional E-value: 4.6e-75
         DUF2428    3 lerllelceriwsvvlpvlsddspeghlpedledeeee.sk.se.............eeeeee..........ltaqvvlscsWralkeasll 70  
                      le+ll+l+ ri+ ++l+v+s+d+    lped++d  ++ s  s+                  +          +++qvv++ +W+a+ke+sll
  NP_001326116.1  992 LEKLLKLVTRITTLALWVVSADALC--LPEDMDDIIDDdSFfSNvqddsaavlseehT----StypkhvhetvQSEQVVMVGCWLAMKEVSLL 1078
                      689****************999987..8999998887755555466666555443220....13445555667889***************** PP

         DUF2428   71 lgtivekvpletekskeds...................llskeqlekigelffeqLlelrHrGAfetvyvgftalcqrllrskdselsqlpeq 144 
                      lgti++k+pl+t++ +  +                   ll+ +qlekig++f+e+Ll+++H+GA++++++gftalc+rll+s+d++l++l+e+
  NP_001326116.1 1079 LGTIIRKIPLPTSSLRPLEngdtassvpndlvignsesLLDLKQLEKIGDHFLEVLLKMKHNGAIDKTRAGFTALCHRLLCSNDPRLCKLTES 1171
                      ***********998765558999********************************************************************** PP

         DUF2428  145 wleelleeik...skslsitRRSAGlPflilailssepksskkklLkkamkeLleiakkpa......................eseeesesee 212 
                      w+e+l+e+     +++++++RRSAG+P++++a++ sep++s kklL +a+++L+ +a+kp+                      ++e+ s+ ++
  NP_001326116.1 1172 WMEQLMERTVakgQTVDDVLRRSAGIPAAFIALFLSEPEGSPKKLLPRALRWLIGLAEKPLmepleqkgskhmveeinssdmhSNEKLSKVRD 1264
                      *******9999*****************************99******************9************99999887765555566669 PP

         DUF2428  213 ksdlpqvhalNiLraifrdskLgeevspyvaeglelaiegfsspvWa 259 
                      +  +p+vha+N+L+a f+d++L++++s + ae+++++i++fssp+W+
  NP_001326116.1 1265 EGVVPTVHAFNVLKATFNDTNLSTDTSGFSAEAMIVSIRSFSSPYWE 1311
                      9*********************************************6 PP



Or compare NP_001326116.1 to CDD or PaperBLAST