NP_898842.2 has 1938 amino acids
Query: DUF2428 [M=259]
Accession: PF10350.13
Description: THADA/TRM732, DUF2428
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-87 279.8 1.4 2.9e-87 278.3 0.0 2.7 2 NP_898842.2
Domain annotation for each sequence (and alignments):
>> NP_898842.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 278.3 0.0 2.9e-87 2.9e-87 2 259 .] 939 1239 .. 938 1239 .. 0.92
2 ? -3.9 0.3 0.36 0.36 119 141 .. 1838 1861 .. 1836 1873 .. 0.72
Alignments for each domain:
== domain 1 score: 278.3 bits; conditional E-value: 2.9e-87
DUF2428 2 llerllelceriwsvvlpvlsddspeghlpedledeeee.sk.s.e.......................................e...eeeee.. 50
ll rll l++r++ vv pv++++speg +p d+++++++ + + + e + e
NP_898842.2 939 LLGRLLLLSYRLSTVVAPVIQSSSPEGLIPVDTDSASASrLQlIlNeiqprdtndyfnhtkilkecdsfdledlstsvsnidssaEvkgK---Eek 1031
6789*****************************98888766665449*************999999999988887777666544314332...134 PP
DUF2428 51 ...ltaqvvlscsWralkeaslllgtivekvpletekskedsllskeqlekigelffeqLlelrHrGAfetvyvgftalcqrllrskdselsqlpe 143
+taq+vl c+Wr++ke++lllgt+++ +p ++ +++++ +l+++q+++ig++f+++Ll++rHrGAfe +y gf++l++ l r+++ +l++lpe
NP_898842.2 1032 acdVTAQMVLACCWRSMKEVALLLGTLCQLLPVQPGPESSNVFLTVQQVKEIGDYFKQHLLQSRHRGAFELAYTGFVKLTEILNRCSNVSLQKLPE 1127
567************************************999****************************************************** PP
DUF2428 144 qwleelleeik....skslsitRRSAGlPflilailssepksskkklLkkamkeLleiakkpaeseeeseseeksdlpqvhalNiLraifrdskLg 235
qwl+++leeik s++l++tRRSAG+Pf+i+a+l+sepk+s+ +lLk +m+eL+++a + +++k ++pqvhalNiLra+frd++Lg
NP_898842.2 1128 QWLRSVLEEIKgsdpSSKLCATRRSAGIPFYIQALLASEPKKSRMDLLKITMRELISLALS--------ADDSKGRVPQVHALNILRALFRDTRLG 1215
******************************************9899*************83........3446778******************** PP
DUF2428 236 eevspyvaeglelaiegfsspvWa 259
e++ pyva g ++ai gf+spvWa
NP_898842.2 1216 ENIIPYVAGGAKAAILGFTSPVWA 1239
***********************7 PP
== domain 2 score: -3.9 bits; conditional E-value: 0.36
DUF2428 119 vyvgftalcqrllrskdse.lsql 141
+++ f lcq ++s++s+ l++l
NP_898842.2 1838 CRQLFHLLCQSGWQSPHSQkLCHL 1861
678899999999999996623333 PP
Or compare NP_898842.2 to CDD or PaperBLAST