NP_001188472.1 has 716 amino acids
Query: FAM161A_B [M=364] Accession: PF10595.13 Description: Protein FAM161A/B Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.3e-55 173.5 39.7 3.3e-55 173.5 39.7 3.5 4 NP_001188472.1 Domain annotation for each sequence (and alignments): >> NP_001188472.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -2.9 0.5 0.14 0.14 288 340 .. 91 145 .. 84 150 .. 0.62 2 ! 173.5 39.7 3.3e-55 3.3e-55 2 364 .] 235 598 .. 234 598 .. 0.86 3 ! 1.1 1.1 0.0087 0.0087 305 341 .. 595 631 .. 595 648 .. 0.82 4 ? -8.0 10.0 1 1 299 354 .. 657 710 .. 642 716 .] 0.57 Alignments for each domain: == domain 1 score: -2.9 bits; conditional E-value: 0.14 FAM161A_B 288 slvkkrkkerkekeekeqqekkeeeerkkk..kkelapkvkkkvaaqdsskklqe 340 s++++ kk ++ k++ + k e+ ++k +ke++p v ++ + +dss+++ e NP_001188472.1 91 SNEEYFKKVEELKAAHIETMAKLEKMYQDKlhLKEVQPVVIREDSLSDSSRSVSE 145 5566666666666666666666665555552246677777776666666666665 PP == domain 2 score: 173.5 bits; conditional E-value: 3.3e-55 FAM161A_B 2 kiTvPkpfsfekRekekkakksirqkkveemleekqkk..eeaelkkrFkAkpvPatvkeplYeeimeeeekRReevreeskaitlqsekPfsFy 94 iTvP+pf++ Re++kk+ s ++k+ em++++ kk e e+kk+F+A+pvPa+v++plY ++++++e+RR+ ++e+sk+ +l s+kPf+F NP_001188472.1 235 TITVPEPFQMMIREQKKKE-ESMKSKSDIEMVHKALKKqeEDPEYKKKFRANPVPASVFLPLYHDLVKQKEERRRSLKEKSKEALLASQKPFKFI 328 69*************9999.99999999999999988876778**************************************************** PP FAM161A_B 95 erdkqkkeklkrkkletv.eerekkkfkankiPksvsdkllkkkeqeqeekrkervekrkqellessk.lpprmekheekkkakkqkkkekkssk 187 r++qk+ ++ ++ + +++ fka++iP s+ + ++k++e+e++r+ r + r+qe l++s+ lp r + ++ + ++ k++ NP_001188472.1 329 AREEQKRAAREKQLRDFLkYKKKTNRFKARPIPRSTYGSTTNDKLKEEELYRNLRTQLRAQEHLQNSSpLPCRSACGCRNPRCP--EQAVKLKC- 420 ***9998765555555558999999************************************98776652777777766666444..33333322. PP FAM161A_B 188 ekeetfepkraksiPdfeklhkeFqkelakkkkklkpTepepfnlqes.hksadrdyldsenesiretkekkakkkldekarl........asik 273 + k+ + Pdfe l + +qk+l + k + T+ +pf+l+ s h s +r+ + + e e++ k++ + + r+ + NP_001188472.1 421 ------KHKVRCPTPDFEDLPERYQKHLSEHKSPKLLTVCKPFDLHASpHASIKREKILADIEA-DEENLKETRWPYLSPRRKspvrcagvNPVP 508 ......23344567*********************************98899999887655533.466666666666555555677777766666 PP FAM161A_B 274 pkeqPrsgstkkteslvkkrkkerkekeekeqqekkeeeerkkkkkelapkvkkkvaaqdsskklqeerkeklkkerkedrqqekeyeqel 364 + P+ t +++ ++++++ +++ek+ e++++ + ++k++ kel++ + +++a ds+++l + +k ++k +rk ++++ +ey++el NP_001188472.1 509 CNCNPP-VPTVSSRGREQAVRRSLEEKKMLEEERNRILTKQKQRMKELQKLLTTRAKAYDSHQSLAQISKSRVKCLRKSEKERMREYQREL 598 677788.99***************************999999999999999*************************************986 PP == domain 3 score: 1.1 bits; conditional E-value: 0.0087 FAM161A_B 305 qqekkeeeerkkkkkelapkvkkkvaaqdsskklqee 341 q e +e+ee+ kk+ l ++v++k a ++++k+ ++ NP_001188472.1 595 QRELEEREEKLKKRPLLFERVAQKNARMAAEKHYSNT 631 556788888889999999*******999999987766 PP == domain 4 score: -8.0 bits; conditional E-value: 1 FAM161A_B 299 ekeekeqqekkeeeerkkkkkelapkvkkkvaaqdsskklqeerkeklkkerkedr 354 ++e k+ e ke + ++k +e+ +++++ + + +s+ ++e++e+ +e +e++ NP_001188472.1 657 NQETKSVTEDKESFNEEEKIEER-ENGEENYFIDTNSQDSYKEKDEA-NEESEEEK 710 55666666666666666666665.55555555555555555555555.23333333 PP
Or compare NP_001188472.1 to CDD or PaperBLAST