VIMSS220478 has 143 amino acids
Query: DUF2946 [M=118]
Accession: PF11162.12
Description: Protein of unknown function (DUF2946)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6e-30 90.6 16.0 7.1e-30 90.4 16.0 1.1 1 VIMSS220478
Domain annotation for each sequence (and alignments):
>> VIMSS220478
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 90.4 16.0 7.1e-30 7.1e-30 2 118 .] 23 138 .. 22 138 .. 0.99
Alignments for each domain:
== domain 1 score: 90.4 bits; conditional E-value: 7.1e-30
DUF2946 2 wlallavllavlaPlvsqaaaaaaaasllageiCssagsaaaaaaaagdagddsaasaadsehCgyCsllaagpalppaalapllpaaaaaaapalal 99
wl l+a+++++++Pl+sq+++++++a++ + + +++a++ ++++++a+++++++++ + ++e+CgyCsll+++palp+a++++ + a++++ ++++
VIMSS220478 23 WLSLFAMWMIFIGPLISQSMPMDHHAGMNMPMDMPMAAA-HQHGGDAHHGHGGDGQLHVMWEKCGYCSLLFNCPALPQALSPLSAGSIAPTTHLLAPT 119
***************************************.********************************************************** PP
DUF2946 100 aaapalpallpaarpRAPP 118
+++a++a++p+ar+RAPP
VIMSS220478 120 HQGHARQAVFPGARSRAPP 138
******************9 PP
Or compare VIMSS220478 to CDD or PaperBLAST