PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS281016 to PF11187 (Mbeg1-like)

VIMSS281016 has 373 amino acids

Query:       Mbeg1-like  [M=224]
Accession:   PF11187.12
Description: Mbeg1-like
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.7e-95  303.2   0.0    7.3e-95  302.8   0.0    1.1  1  VIMSS281016  


Domain annotation for each sequence (and alignments):
>> VIMSS281016  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  302.8   0.0   7.3e-95   7.3e-95       1     223 [.      88     314 ..      88     315 .. 0.99

  Alignments for each domain:
  == domain 1  score: 302.8 bits;  conditional E-value: 7.3e-95
   Mbeg1-like   1 iakskRfkdlklseyvnkldeeeqkqFaAvtfrlskdtlvvafRGtddtligWkedfnlsfrsevkaqksAakYlkkilektegkiylaGhSkGgnlA 98 
                  +++s+R+++l++++yv+++d+e++kqF+A++f+l ++tl+vafRGtd++++gWkedf+++fr++v++q++Aa+Yl++++ ++ g i+++GhSkGgnlA
  VIMSS281016  88 MSESPRWRNLRVGAYVDEFDAETTKQFSACVFELGNGTLYVAFRGTDSSIVGWKEDFMMAFRRPVASQEAAARYLTELAGHWAGPIMVGGHSKGGNLA 185
                  789*********************************************************************************************** PP

   Mbeg1-like  99 vyaaanaeddlqerikkiysfDgPGlekevleseeykrikdkikklvPesSivgmlleheeev....iivkssaegilQHdvfsWevegdefvkaeel 192
                  vyaaan+ +++qeri+ +ys+DgPG++++++++++y ri++ki+k vP sSi+gml+e++e+v    ++v+s+ ++i+QH +++W+v++++fv+a++l
  VIMSS281016 186 VYAAANVPSEIQERITVVYSHDGPGFDEAFFDEDGYVRIASKIHKSVPGSSIIGMLFETREHVedgyTVVSSDGASIMQHFALHWQVDHGQFVQADGL 283
                  **************************************************************99999******************************* PP

   Mbeg1-like 193 tstskvlkktlkewlaelsdeereelvdalf 223
                  ts++++l++t++ w+a+++de+r++++++lf
  VIMSS281016 284 TSSAQYLARTINGWMAKYDDEHRRKFIENLF 314
                  ******************************9 PP



Or compare VIMSS281016 to CDD or PaperBLAST