PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::A0A0U1LQF6 to PF11807 (UstYa)

SwissProt::A0A0U1LQF6 has 300 amino acids

Query:       UstYa  [M=220]
Accession:   PF11807.12
Description: Mycotoxin biosynthesis protein UstYa
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence              Description
    ------- ------ -----    ------- ------ -----   ---- --  --------              -----------
    1.4e-39  122.3   0.1    1.8e-39  122.0   0.1    1.1  1  SwissProt::A0A0U1LQF6  


Domain annotation for each sequence (and alignments):
>> SwissProt::A0A0U1LQF6  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.0   0.1   1.8e-39   1.8e-39      16     220 .]      57     281 ..      37     281 .. 0.82

  Alignments for each domain:
  == domain 1  score: 122.0 bits;  conditional E-value: 1.8e-39
                  UstYa  16 lvillllllllllllsvllssseksard............kkqvsspspaldaieyekkefklasdeepsiyrgepspevdaaWedll 91 
                            l+++++++ l ++l+  l+s+ ++s+ +             ++  +++pald+iey  +++   ++  ++ y g+p++e ++ W+dl+
  SwissProt::A0A0U1LQF6  57 LTFFVVSIGLNFILAILLYSKFHASSFQtewsaavadtdcVRRLVAYTPALDSIEYFATNLR-DAYRSNDQYLGPPTKEREQMWQDLW 143
                            222222222222333333333333333334457888999999******************99.99999999***************** PP

                  UstYa  92 klgailipree...leklgkdpaavvkvpekdeggyiatlevfHqLHCLnllrkelypdyy.......yypnlgegeaeeerlHldHC 169
                             ++ai+++  +   l +++ dp  + kv+++ ++gy a l+v+HqL CL++lr++++             p + ++++ee+r H+d C
  SwissProt::A0A0U1LQF6 144 LHEAIMVETWAmplLNRINLDP--YEKVEGELGDGYNALLQVHHQLGCLDILRQYTWLLSGkyttdgiPVPIFLQKPPEENRRHVDQC 229
                            *********9989999999999..********************************987766689999999***************** PP

                  UstYa 170 idyLrqsimChaDvtll..tfnwvdgtdgpvpdfntehqCrdfdalldWaker 220
                            i+ Lr+ +mCh+D t+l  t  + dg +g + d+nt+  Cr+f++l++W+ ++
  SwissProt::A0A0U1LQF6 230 IEELRMGLMCHGDMTPLliTKKR-DGASGFKADMNTHYMCRNFTKLQEWTMSH 281
                            *****************755444.44799999*****************9886 PP



Or compare SwissProt::A0A0U1LQF6 to CDD or PaperBLAST