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Align NP_060497.3 to PF11819 (CUPID)

NP_060497.3 has 1039 amino acids

Query:       CUPID  [M=136]
Accession:   PF11819.12
Description: Cytohesin Ubiquitin Protein Inducing Domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.5e-64  201.2   4.9    3.5e-64  201.2   4.9    2.1  2  NP_060497.3  


Domain annotation for each sequence (and alignments):
>> NP_060497.3  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  201.2   4.9   3.5e-64   3.5e-64       2     136 .]     357     491 ..     356     491 .. 0.99
   2 ?   -2.2   0.3      0.23      0.23       7      28 ..     951     972 ..     943     988 .. 0.59

  Alignments for each domain:
  == domain 1  score: 201.2 bits;  conditional E-value: 3.5e-64
        CUPID   2 skgelissssgsllssgsdesessekdkkeklralkkkqkaLqekLelkleELkklClrEAeLtGklpkeypLepgekppqvrRrigaafkldeekil 99 
                  skg++is+ssgsllssgs+es+ss+++kk++l+alk++q+aL+e+L+++leELkklClrEAeLtGklp eypL+pge+pp vrRrig+afklde+kil
  NP_060497.3 357 SKGKIISGSSGSLLSSGSQESDSSQSAKKDMLAALKSRQEALEETLRQRLEELKKLCLREAELTGKLPVEYPLDPGEEPPIVRRRIGTAFKLDEQKIL 454
                  89************************************************************************************************ PP

        CUPID 100 qkeedpeLesLerelalqqqiveAarrLaeeenlske 136
                  +k e++eLe+Lere+a+q+qi+eAarrLa+++n+sk+
  NP_060497.3 455 PKGEEAELERLEREFAIQSQITEAARRLASDPNVSKK 491
                  ***********************************96 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.23
        CUPID   7 issssgsllssgsdesessekd 28 
                   ss+sgs  s+ s+++ + ++ 
  NP_060497.3 951 TSSDSGSQYSTSSQSTFVAHSR 972
                  4566666666666665555543 PP



Or compare NP_060497.3 to CDD or PaperBLAST