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Align Q96HB5 to PF11819 (CUPID)

Q96HB5 has 630 amino acids

Query:       CUPID  [M=136]
Accession:   PF11819.12
Description: Cytohesin Ubiquitin Protein Inducing Domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-49  153.1   2.0      5e-49  152.0   2.0    1.6  1  Q96HB5    


Domain annotation for each sequence (and alignments):
>> Q96HB5  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.0   2.0     5e-49     5e-49       1     135 [.       2     140 ..       2     141 .. 0.98

  Alignments for each domain:
  == domain 1  score: 152.0 bits;  conditional E-value: 5e-49
   CUPID   1 eskgelissssgsllssgsdesessekdkkeklralkkkqkaLqekLelkleELkklClrEAeLtGklpkeypLepgekppqvrRrigaafkldeekilqk.. 101
             e+kg+liss+++++++++  e++++ k  +e+lr l+++q++Lqe+L+lkl+EL+k+Cl+EAeLtG+lp e+pLepge+p+ vrRr+ +a +++  + +q+  
  Q96HB5   2 EVKGQLISSPTFNAPAALFGEAAPQVK--SERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPGERPQLVRRRPPTARAYPPPHPNQAhh 102
             79*************************..9*****************************************************************99999899 PP

   CUPID 102 ....eedpeLesLerelalqqqiveAarrLaeeenlsk 135
                 +e+ +Le+Lere+++qqqi++AarrLa +++ls+
  Q96HB5 103 slcpAEELALEALEREVSVQQQIAAAARRLALAPDLST 140
             99999*******************************97 PP



Or compare Q96HB5 to CDD or PaperBLAST