SwissProt::A2AEV7 has 629 amino acids
Query: CUPID [M=136]
Accession: PF11819.12
Description: Cytohesin Ubiquitin Protein Inducing Domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-47 147.0 0.6 3.6e-47 146.0 0.6 1.5 1 SwissProt::A2AEV7
Domain annotation for each sequence (and alignments):
>> SwissProt::A2AEV7
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 146.0 0.6 3.6e-47 3.6e-47 1 134 [. 2 139 .. 2 141 .. 0.97
Alignments for each domain:
== domain 1 score: 146.0 bits; conditional E-value: 3.6e-47
CUPID 1 eskgelissssgsllssgsdesessekdkkeklralkkkqkaLqekLelkleELkklClrEAeLtGklpkeypLepgekppqvrRrigaafk 92
e+kg+liss+++ +++++ e+++ k +++lr l+++q+aLqe+L+ kl+EL+k+Cl+EAeLtG+lp e+pLepge+p+ vrRr+ aa +
SwissProt::A2AEV7 2 EVKGQLISSPTFTAPAALFGEAAPLVK--SDRLRGLLDRQRALQEALSVKLQELRKVCLQEAELTGQLPPECPLEPGERPQLVRRRPPAARA 91
79*************************..9************************************************************** PP
CUPID 93 ldeekilqk......eedpeLesLerelalqqqiveAarrLaeeenls 134
++ + +++ +e+ +Le+Lere+++qqqi++AarrLa +++l
SwissProt::A2AEV7 92 YPPPHPNPAhhslcpAEELALEALEREVSVQQQIAAAARRLALAPDLN 139
**99988888899999*****************************985 PP
Or compare SwissProt::A2AEV7 to CDD or PaperBLAST