biolip::6w98A has 1312 amino acids
Query: DUF3367 [M=662]
Accession: PF11847.12
Description: Alpha-(1->3)-arabinofuranosyltransferase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.4e-241 787.7 40.8 7.5e-122 393.4 38.6 3.3 2 biolip::6w98A
Domain annotation for each sequence (and alignments):
>> biolip::6w98A
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 393.4 38.6 7.5e-122 7.5e-122 3 308 .. 22 304 .. 20 304 .. 0.98
2 ! 392.5 0.1 1.4e-121 1.4e-121 333 661 .. 302 628 .. 300 629 .. 0.96
Alignments for each domain:
== domain 1 score: 393.4 bits; conditional E-value: 7.5e-122
DUF3367 3 lvlaflqspGlivaDTKldltanPlgFLaralhlWddtaplGqlqnQayGYlfPhglFfalgdllglpaWvtqRlWwalllvvaflGvlrlaealg 98
l+l+f+qspG+i++DTKldl+ nPl+F aral+lW++++p+Gq qnQayGYlfPhg+Ff lg+llg+paWvtqRlWwall+v++f+G++r+aealg
biolip::6w98A 22 LLLTFSQSPGQISPDTKLDLAINPLRFAARALNLWSSDLPFGQAQNQAYGYLFPHGAFFSLGHLLGVPAWVTQRLWWALLIVAGFWGLIRVAEALG 117
789********************************************************************************************* PP
DUF3367 99 igseasrvlaalayalsPrvlttlgaiSsealpvalaPWvllPlvsa.rerkslrraaalsalavalmGavNAvatlaalllavlwlltrrrnrrk 193
ig++ sr++aa+a+alsPrvlttlgaiSse+lp++laPWvllPl+ + + r s+rraaalsa+avalmGavNAvat+ a+ +av+w+l++r+nr++
biolip::6w98A 118 IGTRGSRIIAAVAFALSPRVLTTLGAISSETLPMMLAPWVLLPLILTfQGRMSPRRAAALSAVAVALMGAVNAVATALACGVAVIWWLAHRPNRTW 213
*********************************************9879999******************************************** PP
DUF3367 194 lrllawWlvavvlatlWwivpLlllgrysppFldyiEsaavTtewtslvevlrGttsWvpfvsperpagaelvtepvlvlatalvaalGLaGLarr 289
+r++awW+++++la++Wwiv+Ll++g++sp Fld+iEs tsl+evlrGt vt++++v+at+++aa+G+aGLa+r
biolip::6w98A 214 WRFTAWWIPCLALASTWWIVALLIFGKISPKFLDFIES-------TSLTEVLRGT-----------------VTQSAMVIATTMLAAAGMAGLAMR 285
*************************************9.......5789*****9.................899********************* PP
DUF3367 290 slpergflvlillvgvlll 308
+p+rg+lv++ll+g++ll
biolip::6w98A 286 GMPARGRLVAVLLIGLVLL 304
****************986 PP
== domain 2 score: 392.5 bits; conditional E-value: 1.4e-121
DUF3367 333 apLRNvhKfdplvrLplvlGlahllaavplpasaraaeaakalkkrvavavlvvvvvaaaaapawtgrlapagayeevPeyWseaadwLeekaaee 428
+ LRNvhK++pl+rLpl+lGlah+l+++plpas+++ +++va a++ +v++aa++++awtgrl+p+g+++++P yW+++a+wL+++++++
biolip::6w98A 302 VLLRNVHKLEPLIRLPLILGLAHALSRIPLPASVPV-------NRAVAFAIVLLVALAASTSLAWTGRLVPRGGFDAIPGYWNDTAHWLADHDTGG 390
679******************************986.......67999************************************************ PP
DUF3367 429 raLvvPgasfaeqeWGltrDeplqpLlespwavrdavPlvppgaiRaldsveralaegrasagladtLarqGigyvvvRnDLdretsdsarpalvk 524
raLvvPga+fa q+WGltrDeplq+L ++pw+vrd++Pl+pp++iRa+dsv++ +a+gr+s+gladtL++qGi+y+vvRnDLd++ts+sarp+lv+
biolip::6w98A 391 RALVVPGAPFAIQTWGLTRDEPLQALGQTPWGVRDSIPLTPPETIRAIDSVQQLFAAGRPSDGLADTLREQGISYLVVRNDLDPDTSRSARPILVH 486
************************************************************************************************ PP
DUF3367 525 raleespGltrvaeFGpevekeeeeelvadeglrarypaveiyrvdea..aakaalvdadevavvaggpEsllrlae...aglleadrpallaada 615
+++e+spGlt+va+FG++v++ ++e++vad++lr++ypaveiy+v ++ +++++d+d++++vaggpE+llrl+e + + ++ p lla+da
biolip::6w98A 487 HTIEGSPGLTKVAQFGDPVGAGAVEGFVADSDLRPQYPAVEIYAVGANdhDGEPYFTDIDTMPRVAGGPEALLRLNErrrQLNEPPLGPSLLATDA 582
*********************************************99855699************************876444455569******* PP
DUF3367 616 eaaelpaeevivtDtlrrretnfgrvddnsSailaadderrsanav 661
++a+l + ++vtDt+ +ret++grvdd+sSai+a++d+rr+ n+v
biolip::6w98A 583 AQAGLRPGPAVVTDTPLARETDYGRVDDHSSAIRAPGDKRRTFNRV 628
*****99999********************************9986 PP
Or compare biolip::6w98A to CDD or PaperBLAST