biolip::6wbyA has 1250 amino acids
Query: DUF3367 [M=662]
Accession: PF11847.12
Description: Alpha-(1->3)-arabinofuranosyltransferase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.9e-235 766.7 53.5 5.1e-121 390.6 0.1 3.4 4 biolip::6wbyA
Domain annotation for each sequence (and alignments):
>> biolip::6wbyA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 370.6 25.6 6.1e-115 6.1e-115 3 234 .. 19 251 .. 17 257 .. 0.97
2 ! 25.4 5.7 1.7e-10 1.7e-10 267 308 .. 255 296 .. 249 296 .. 0.95
3 ! 390.6 0.1 5.1e-121 5.1e-121 335 661 .. 295 622 .. 294 623 .. 0.96
4 ? -7.4 3.9 1 1 169 207 .. 1200 1240 .. 1195 1245 .. 0.51
Alignments for each domain:
== domain 1 score: 370.6 bits; conditional E-value: 6.1e-115
DUF3367 3 lvlaflqspGlivaDTKldltanPlgFLaralhlWddtaplGqlqnQayGYlfPhglFfalgdllglpaWvtqRlWwalllvvaflGvlrlaealg 98
l+l+f+qspG+i++DTKldl+ nPl+F aral+lW++++p+Gq qnQayGYlfPhg+Ff lg+llg+paWvtqRlWwall+v++f+G++r+aealg
biolip::6wbyA 19 LLLTFSQSPGQISPDTKLDLAINPLRFAARALNLWSSDLPFGQAQNQAYGYLFPHGAFFSLGHLLGVPAWVTQRLWWALLIVAGFWGLIRVAEALG 114
789********************************************************************************************* PP
DUF3367 99 igseasrvlaalayalsPrvlttlgaiSsealpvalaPWvllPlvsa.rerkslrraaalsalavalmGavNAvatlaalllavlwlltrrrnrrk 193
ig++ sr++aa+a+alsPrvlttlgaiSse+lp++laPWvllPl+ + + r s+rraaalsa+avalmGavNAvat+ a+ +av+w+l++r+nr++
biolip::6wbyA 115 IGTRGSRIIAAVAFALSPRVLTTLGAISSETLPMMLAPWVLLPLILTfQGRMSPRRAAALSAVAVALMGAVNAVATALACGVAVIWWLAHRPNRTW 210
*********************************************9879999******************************************** PP
DUF3367 194 lrllawWlvavvlatlWwivpLlllgrysppFldyiEsaav 234
+r++awW+++++la++Wwiv+Ll++g++sp Fld+iE ++v
biolip::6wbyA 211 WRFTAWWIPCLALASTWWIVALLIFGKISPKFLDFIELTEV 251
*************************************6554 PP
== domain 2 score: 25.4 bits; conditional E-value: 1.7e-10
DUF3367 267 tepvlvlatalvaalGLaGLarrslpergflvlillvgvlll 308
t++++v+at+++aa+G+aGLa+r +p+rg+lv++ll+g++ll
biolip::6wbyA 255 TQSAMVIATTMLAAAGMAGLAMRGMPARGRLVAVLLIGLVLL 296
7899***********************************986 PP
== domain 3 score: 390.6 bits; conditional E-value: 5.1e-121
DUF3367 335 LRNvhKfdplvrLplvlGlahllaavplpasaraaeaakalkkrvavavlvvvvvaaaaapawtgrlapagayeevPeyWseaadwLeekaaeera 430
L NvhK++pl+rLpl+lGlah+l+++plpas++++++ ++va a++ +v++aa++++awtgrl+p+g+++++P yW+++a+wL+++++++ra
biolip::6wbyA 295 LLNVHKLEPLIRLPLILGLAHALSRIPLPASVPVRQWL----RAVAFAIVLLVALAASTSLAWTGRLVPRGGFDAIPGYWNDTAHWLADHDTGGRA 386
66******************************987765....889*************************************************** PP
DUF3367 431 LvvPgasfaeqeWGltrDeplqpLlespwavrdavPlvppgaiRaldsveralaegrasagladtLarqGigyvvvRnDLdretsdsarpalvkra 526
LvvPga+fa q+WGltrDeplq+L ++pw+vrd++Pl+pp++iRa+dsv++ +a+gr+s+gladtL++qGi+y+vvRnDLd++ts+sarp+lv+++
biolip::6wbyA 387 LVVPGAPFAIQTWGLTRDEPLQALGQTPWGVRDSIPLTPPETIRAIDSVQQLFAAGRPSDGLADTLREQGISYLVVRNDLDPDTSRSARPILVHHT 482
************************************************************************************************ PP
DUF3367 527 leespGltrvaeFGpevekeeeeelvadeglrarypaveiyrvdea..aakaalvdadevavvaggpEsllrlae...aglleadrpallaadaea 617
+e+spGlt+va+FG++v++ ++e++vad++lr++ypaveiy+v ++ +++++d+d++++vaggpE+llrl+e + + ++ p lla+da++
biolip::6wbyA 483 IEGSPGLTKVAQFGDPVGAGAVEGFVADSDLRPQYPAVEIYAVGANdhDGEPYFTDIDTMPRVAGGPEALLRLNErrrQLNEPPLGPSLLATDAAQ 578
*******************************************99855699************************876444455569********* PP
DUF3367 618 aelpaeevivtDtlrrretnfgrvddnsSailaadderrsanav 661
a+l + ++vtDt+ +ret++grvdd+sSai+a++d+rr+ n+v
biolip::6wbyA 579 AGLRPGPAVVTDTPLARETDYGRVDDHSSAIRAPGDKRRTFNRV 622
***99999********************************9986 PP
== domain 4 score: -7.4 bits; conditional E-value: 1
DUF3367 169 NAvatlaalllavlwlltr..rrnrrklrllawWlvavvla 207
a l+a+ a+++l+ ++l+ wW+ +++l
biolip::6wbyA 1200 AVLAALTAVTAAGVYLAGGslLLAGAALSRHSWWIQLLALI 1240
34444555555555555441123355566666666666554 PP
Or compare biolip::6wbyA to CDD or PaperBLAST