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Align NP_004971.2 to PF11879 (DUF3399)

NP_004971.2 has 655 amino acids

Query:       DUF3399  [M=76]
Accession:   PF11879.12
Description: Domain of unknown function (DUF3399)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      6e-40  121.9   7.0    1.6e-39  120.6   7.0    1.8  1  NP_004971.2  


Domain annotation for each sequence (and alignments):
>> NP_004971.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.6   7.0   1.6e-39   1.6e-39       2      75 ..     469     562 ..     468     563 .. 0.98

  Alignments for each domain:
  == domain 1  score: 120.6 bits;  conditional E-value: 1.6e-39
      DUF3399   2 tsllEsQHHHLLhCLEKTT...................nheFvdEqtyeenclevslqkrps.rspslssqegltssCCsrrakrsirlpnssl 75 
                  tsl+EsQHHHLLhCLEKTT                   nheF+dEq++e+nc+e+s+q++ps rspslss+ glt++CCsrr+k++++lpns+l
  NP_004971.2 469 TSLIESQHHHLLHCLEKTTglsylvddpllsvrtstikNHEFIDEQMFEQNCMESSMQNYPStRSPSLSSHPGLTTTCCSRRSKKTTHLPNSNL 562
                  79******************************************************************************************96 PP



Or compare NP_004971.2 to CDD or PaperBLAST