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Align NP_032449.1 to PF11879 (DUF3399)

NP_032449.1 has 651 amino acids

Query:       DUF3399  [M=104]
Accession:   PF11879.8
Description: Domain of unknown function (DUF3399)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-41  127.5   1.2    2.5e-41  126.5   1.2    1.5  1  NP_032449.1  


Domain annotation for each sequence (and alignments):
>> NP_032449.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.5   1.2   2.5e-41   2.5e-41       1     104 []     447     550 ..     447     550 .. 0.94

  Alignments for each domain:
  == domain 1  score: 126.5 bits;  conditional E-value: 2.5e-41
      DUF3399   1 lqskrnglledalelteseeeealvtkstsllEsqHHHLLhCLEKttnheFvdEqtyeenllevslqkrpsrspslssq.egl...assCCsrrakkr 94 
                  lq+k+ng led    ++s + + l+++s+s++E+qHHHLLhCLEKtt+heF+dE t++e+l +vsl+ r+srs+s+ssq  g     ssCCsrr  +r
  NP_032449.1 447 LQYKQNGGLED----SGSGDGQMLCVRSRSAFEQQHHHLLHCLEKTTCHEFTDELTFSEALGAVSLGGRTSRSTSVSSQpMGPgslFSSCCSRRVNRR 540
                  79******999....89999***********************************************************53336669*********** PP

      DUF3399  95 airlanstvs 104
                  airlanst+s
  NP_032449.1 541 AIRLANSTAS 550
                  *******975 PP



Or compare NP_032449.1 to CDD or PaperBLAST