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Align SwissProt::Q63881 to PF11879 (DUF3399)

SwissProt::Q63881 has 630 amino acids

Query:       DUF3399  [M=104]
Accession:   PF11879.8
Description: Domain of unknown function (DUF3399)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    2.1e-45  139.7   8.6    4.9e-45  138.4   8.6    1.7  1  SwissProt::Q63881  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q63881  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.4   8.6   4.9e-45   4.9e-45       1     104 []     445     546 ..     445     546 .. 0.96

  Alignments for each domain:
  == domain 1  score: 138.4 bits;  conditional E-value: 4.9e-45
            DUF3399   1 lqskrnglledalelteseeeealvtkstsllEsqHHHLLhCLEKttnheFvdEqtyeenllevslqkrps.rspslssqeglassCCsrra 91 
                        +qskrngll++  +l++se+e a v+ks s++E+qHHHLLhCLEKttnheFvdEq++ee+++ev++ +rps +spslssq+g++s+CCsrr+
  SwissProt::Q63881 445 MQSKRNGLLSN--QLQSSEDEPAFVSKSGSSFETQHHHLLHCLEKTTNHEFVDEQVFEESCMEVATVNRPSsHSPSLSSQQGVTSTCCSRRH 534
                        79********9..5668999**************************************************99******************** PP

            DUF3399  92 kkrairlanstvs 104
                        kk ++r++n++vs
  SwissProt::Q63881 535 KK-SFRIPNANVS 546
                        **.67*****986 PP



Or compare SwissProt::Q63881 to CDD or PaperBLAST