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Align XP_018100233.1 to PF11879 (DUF3399)

XP_018100233.1 has 653 amino acids

Query:       DUF3399  [M=104]
Accession:   PF11879.8
Description: Domain of unknown function (DUF3399)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.5e-46  141.5   6.6    1.6e-45  140.0   6.6    1.8  1  XP_018100233.1  


Domain annotation for each sequence (and alignments):
>> XP_018100233.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.0   6.6   1.6e-45   1.6e-45       1     104 []     442     563 ..     442     563 .. 0.97

  Alignments for each domain:
  == domain 1  score: 140.0 bits;  conditional E-value: 1.6e-45
         DUF3399   1 lqskrnglledalelteseeeealvtkstsllEsqHHHLLhCLEKtt...................nheFvdEqtyeenllevslqkrps.rsps 75 
                     l+skrngll++alel +s+ee  ++ ks+sl+EsqHHHLLhCLEKtt                   nheF+dEq++e+n+ e+s+q++ps rsps
  XP_018100233.1 442 LHSKRNGLLNEALELMGSTEEP-HIGKSASLIESQHHHLLHCLEKTTglsylvddpllsvrtstmkNHEFMDEQMFEQNCRENSMQNYPSsRSPS 535
                     79*************9999988.789****************************************************************9**** PP

         DUF3399  76 lssqeglassCCsrrakkrairlanstvs 104
                     lss++gl++sCCsrr+kk++ +l+ns+v+
  XP_018100233.1 536 LSSHHGLTTSCCSRRNKKTT-HLPNSNVP 563
                     ******************77.*****985 PP



Or compare XP_018100233.1 to CDD or PaperBLAST