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Align VIMSS1749496 to PF11896 (DUF3416)

VIMSS1749496 has 692 amino acids

Query:       DUF3416  [M=179]
Accession:   PF11896.8
Description: Domain of unknown function (DUF3416)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.7e-62  195.1   0.0    9.9e-62  194.5   0.0    1.3  1  VIMSS1749496  


Domain annotation for each sequence (and alignments):
>> VIMSS1749496  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.5   0.0   9.9e-62   9.9e-62       1     179 []       3     217 ..       3     217 .. 0.92

  Alignments for each domain:
  == domain 1  score: 194.5 bits;  conditional E-value: 9.9e-62
       DUF3416   1 griaIedvsPevdgGrfpaKavvGetvpVeAdvfrdGhdalaAtlvlr............................ragekewqevpMt.pggndrw 68 
                   gri I+dv+P+v++Gr+paKavvGe+vpV+A+v+r+Ghda++Atlv+r                              ++ + q ++M+    +d++
  VIMSS1749496   3 GRIGIDDVAPVVSCGRYPAKAVVGEVVPVRATVWREGHDAVSATLVVRylgtefprlasgpgttppavplgtvvqpG-KRVKPQILQMSkGRTPDVF 98 
                   69**********************************************99999999999999999999888888642.34788899***85569*** PP

       DUF3416  69 easftpdelGryeftveAWvDpfatWrhdlekkveagqdvele...leeGarlleraaeraea....aalraaaaalrdd..peerlaaalseevaa 156
                   +++ftpd++G ++f+v++W Dp+atWrh++e+k+eagq+ ++    l+ Garll raae        ++l +aa++lr++  p +r+  als+eva+
  VIMSS1749496  99 HGEFTPDAVGLWTFRVDGWGDPIATWRHAVEAKLEAGQSETELnndLLVGARLLMRAAEGV-PrklrDPLLEAAQQLRTPgdPYQRAGGALSPEVAD 194
                   *************************************987766677************665.2599999********88888*************** PP

       DUF3416 157 llaryplrelatrseklpveVdR 179
                   ll +yplre++tr+e + v+VdR
  VIMSS1749496 195 LLLQYPLREFVTRGEVHGVWVDR 217
                   **********************9 PP



Or compare VIMSS1749496 to CDD or PaperBLAST