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Align VIMSS1935846 to PF11896 (DUF3416)

VIMSS1935846 has 701 amino acids

Query:       DUF3416  [M=179]
Accession:   PF11896.8
Description: Domain of unknown function (DUF3416)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.7e-61  191.5   0.0    1.3e-60  190.9   0.0    1.2  1  VIMSS1935846  


Domain annotation for each sequence (and alignments):
>> VIMSS1935846  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.9   0.0   1.3e-60   1.3e-60       1     179 []      16     226 ..      16     226 .. 0.92

  Alignments for each domain:
  == domain 1  score: 190.9 bits;  conditional E-value: 1.3e-60
       DUF3416   1 griaIedvsPevdgGrfpaKavvGetvpVeAdvfrdGhdalaAtlvlr.......................ragekewqevpMt.pggndrweasft 73 
                   gr++I+dv+P+v++G +paKavvGe+vpV+A+v+r+Gh+a+aAtlv+r                        +++ +   +pMt  +++ +++++ft
  VIMSS1935846  16 GRVEIDDVAPVVSCGVYPAKAVVGEVVPVSAAVWREGHEAVAATLVVRylgvryphltdrprarvlptpsePQQRVKPLLIPMTsGQEPFVFHGQFT 112
                   69**********************************************99999999999998888888877444577789****855699******* PP

       DUF3416  74 pdelGryeftveAWvDpfatWrhdlekkveagqdvele...leeGarlleraaeraea.....aalraaaaalrdd..peerlaaalseevaallar 160
                   pd++G ++f+v++W Dp++tWrh+l +k++agq  ++    l+ Ga lleraa+   +     ++l aaaaalr++  p +r a+al++e+++lla 
  VIMSS1935846 113 PDRVGLWTFRVDGWGDPIHTWRHGLIAKLDAGQGETELsndLLVGAVLLERAATG--VprglrDPLLAAAAALRTPgdPVTRTALALTPEIEELLAD 207
                   ********************************876655555************55..34699999********887889****************** PP

       DUF3416 161 yplrelatrseklpveVdR 179
                   yplr+l+tr+e++ v+VdR
  VIMSS1935846 208 YPLRDLVTRGEQFGVWVDR 226
                   ******************9 PP



Or compare VIMSS1935846 to CDD or PaperBLAST